Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01017 ATGGGAGAGGTGAAGCTACATGGGTTTTGGTACAGTCCGTTCGCATTGAGGGTGAAGTGGAGCTTAAAGCTGAAAGGTATTGAGTATGAGAACATTGAAGAGGATCGATTCAACAAAACTCCTCAACTGCTTCAATACAATCCTGTCTACAAGAGAATCCCCGTTCTCGTTCATGCTGGAAAACCCATTTCTGAATCCATGCTCATAATCGAATACATCGATCAGGTTTGGCCTCAACATCCACTCTTACCTTCTCATCCCTACCACAGAGCTCTCGCACGATTTTGGGTCAAATACTCTGATGATCTGGTAATCACTTTCACTTCACAATTCACAATTACCAAAAATGTGGAAGAGAGAAAGAAGGCCATAGAGGATATTTGGGAGCATTTGAGAGTTGTGGAAGATCAGTGTTTTGGTAAGGAAAACAAATTCTTTGGAGGAGAGAGTGTTAATGTTGTGGACTTGGCTTTTGGGTCCATCATCAAATATATTACTGTGTTGGAAGATATCTTTGAAGAGCAAATTCTTGAAGCACAGAAATTCCCTCGTTTGTATTCATGGTTTAATATCTTCAAATCTGAACCAATCATCGCAGAAATCTTACCTGACCAGGATCAAATGGTAGCTTTTCTTACACCTCGTAGAGAACAAATTCTGGCATCGTCGTGA 672 0.4077 MGEVKLHGFWYSPFALRVKWSLKLKGIEYENIEEDRFNKTPQLLQYNPVYKRIPVLVHAGKPISESMLIIEYIDQVWPQHPLLPSHPYHRALARFWVKYSDDLVITFTSQFTITKNVEERKKAIEDIWEHLRVVEDQCFGKENKFFGGESVNVVDLAFGSIIKYITVLEDIFEEQILEAQKFPRLYSWFNIFKSEPIIAEILPDQDQMVAFLTPRREQILASS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01017 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vian3g01017 223 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Vian3g01017 223 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Vian3g01017 223 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
Vian3g01017 223 CDD GST_N_Tau 4 77 - -
Vian3g01017 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 209 IPR045073 -
Vian3g01017 223 SFLD Glutathione Transferase (cytosolic) 1 222 IPR040079 -
Vian3g01017 223 Gene3D - 83 223 - -
Vian3g01017 223 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vian3g01017 223 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Vian3g01017 223 Gene3D Glutaredoxin 1 82 - -
Vian3g01017 223 FunFam Tau class glutathione S-transferase 1 85 - -
Vian3g01017 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 212 IPR010987 -
Vian3g01017 223 Pfam Glutathione S-transferase, C-terminal domain 114 195 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01017 Vian-Chr3 11100206 11100972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01017 3 219 Glutathione S-transferase Gene Family AT2G29420 39.171 8.70e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01017 K00799 - gmx:547584 295.434