Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01010 ATGGAAAAGTTACTTTTGCTCTATTGTTCTCTCCTCTTTTGTTTTGCAACTATCACCTTCACATGCTCAGCTACTACTTACACTGTTGGAGATAGCTCTGGTTGGGACATTAGCACAAATCTTAATACATGGATTACTGATAAGAAGTTCAAAGTAGGAGATGCTCTTGTTTTTCAGTATTCATCAGGCCAAAGCGTAGAAGAGGTTACAAAAGAAAACTTTGAGACATGTAACACCAGCAATGTTTTGGCAACATATGGGAATGGTAACACAACAGTGCCATTGAGAAAAGGTGGGGACATATATTTTGTAAGTGGAAACAAGTTGTATTGTCTTGGAGGAATGAAACTTCATGTTCATGTTGAAGGTGATGATGACAAATCATTTGCTCCAACTATAGCACCTAAGGCTGTGGCTGGATCTGAGGAAAACACTGCCACACTTACAAACTCTCCTTCATCAAAGAAAAACACACATCTTTCAGCTGGAACTCTCAATCATTGCGCAAGGAATGCACTTCAGTTTGTCTGTATTGCTGTTATGGTTGCTGCATATTTTAGCATATAA 567 0.3862 MEKLLLLYCSLLFCFATITFTCSATTYTVGDSSGWDISTNLNTWITDKKFKVGDALVFQYSSGQSVEEVTKENFETCNTSNVLATYGNGNTTVPLRKGGDIYFVSGNKLYCLGGMKLHVHVEGDDDKSFAPTIAPKAVAGSEENTATLTNSPSSKKNTHLSAGTLNHCARNALQFVCIAVMVAAYFSI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01010 188 Pfam Plastocyanin-like domain 36 115 IPR003245 GO:0009055
Vian3g01010 188 FunFam Blue copper 23 127 - -
Vian3g01010 188 ProSiteProfiles Phytocyanin domain profile. 25 123 IPR003245 GO:0009055
Vian3g01010 188 PANTHER BLUE COPPER PROTEIN 24 145 IPR039391 GO:0009055
Vian3g01010 188 Gene3D - 23 128 IPR008972 -
Vian3g01010 188 SUPERFAMILY Cupredoxins 24 121 IPR008972 -
Vian3g01010 188 CDD Phytocyanin 25 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01010 Vian-Chr3 11052604 11053367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01010 7 140 Phytocyanin Superfamily AT4G31840 38.298 4.02e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01010 - - vun:114192316 327.791