Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00995 ATGAGTTCATTCAACCAGTTCAAACAGGGCAGCAGATTTTTAGCAAGTAAGCAAAGGAATGAGGTTGATGCTAAAGAAGAAATCTTCAAAATTGATGGAGCACGTATAAAACCAACGGAAGTTAAGAATTCCGCAGGAAACACAACATTTGCGACAAACTATGGACGTTGGTTGGAAAAACACAAGAAACTTATTTGTGAGATACGGAGTGCTTTAAAAGATGAAGTTGTTGATGACAAACTAGTGTTTCTTATAGACATTGCCATGAAGCACTATTTGGAATTCTCAGAAATGGAAACAAGTGCTGCAAATTTTGATGTCAGCAATGTTGCCTGGTGCACAACAGCTGACCAAAGTCTGTGGTGGATTGGAGGATTTCGCCCTTCTCAACTGCTCCAGGTTATTGTGCCTCAACTTCAACATTCGTGTTCTCAGCAGCAACTTTCTGATATTTGCAATTTTGTACAATCATGTGAACAAGTAGAATATGCTCTTGCACGAGGCATGGAGAAACTTCACCAAATCCTTCATAATATTGCAACAACAGAAGAGGAATTTTTGCATCGACTGCGTGGTCTGCTCACAAATAGTCAGTATGCAGAATTCTTACTTGGTTTGTGGGAACGCCTCTATAATCCTTCCAGCTCACTTTGA 654 0.3991 MSSFNQFKQGSRFLASKQRNEVDAKEEIFKIDGARIKPTEVKNSAGNTTFATNYGRWLEKHKKLICEIRSALKDEVVDDKLVFLIDIAMKHYLEFSEMETSAANFDVSNVAWCTTADQSLWWIGGFRPSQLLQVIVPQLQHSCSQQQLSDICNFVQSCEQVEYALARGMEKLHQILHNIATTEEEFLHRLRGLLTNSQYAEFLLGLWERLYNPSSSL 217
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00995 217 PANTHER TRANSCRIPTION FACTOR TGA9 43 179 - -
Vian3g00995 217 Pfam Seed dormancy control 65 136 IPR025422 GO:0006351|GO:0043565
Vian3g00995 217 ProSiteProfiles DOG1 domain profile. 47 217 IPR025422 GO:0006351|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian3g00995 Vian-Chr3 10912374 10913429 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00995 44 176 Calmodulin-binding Proteins AT5G10030 44.853 1.04e-34 124
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00995 K14431 - var:108342635 417.157