Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00987 ATGAAGATGGGAATTGCAGTGGCAGGTGTTGATGTGTTGAGTGAAAAAGCAGCGATGATGAGAGAGTCTCTGCAGAAGAGTCAAACCATCGCGGACAACGTCGTCACCATTCTAGGCTCCTTCGACCACCGTCTCTCGGCACTTGAAACTGCCATGCGTCCAACTCAGATTAGAACTCATTCCATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTATATTGGCTCACTTTGATCAATATCGTCAGGCTGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTCAAGCAATTGAAAACTTGAGAAGCAATATTCAGTTTTTTGGCAGTAAGAAGGGTTTTAAGAGCACTGATGGCATTGTTGTTCATGCTAATAATTTGTTAGCTAAGGCTATTTCAAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGTCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCAGGATCACCTCACCATGAGGGTGATCCCAGTGGCAAGATACCTTCTAATCACCATTCTGAGTCTCACAACAATAATGCCGATGCTGTTGTATATACCCCTCCCGCTCTTATACCACCAAGATTTTTGCCACTGCTACACGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGGGATGCCCGTTCTAATGTGTTGGAAGAGAGCCTTCAAAAACTTGGAGTTGAAAAACTCAACAAAGATGATGTTCAAAAGCTGCAATGGGAGATCTTGGAAGCTAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTTGCTGAGGTGACGAAAAACAGTGTTTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTCTGGACATGTATGAAATAATGCAAGAGCTTCATTCTGAGATTGAAACTCTTTTTAAAGGCGAAGCTTGCTTTGGAATAAGAGAAGCTGCAACTAGTTTGACAAAACGTCTTGCACAAACAGCCCAAGAAACCTTCGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACCAAGACTGCTGTAACAGATGGAACTGTCCATCCTCTGACAAGCTATGTTATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAGGGGGTAATGATTCTTCACAGCTAGCATCTGTAACAGTGCGAATAATGCAAGCTTTGCAAACTAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGGATTGACACATCTTTTTCTCATGAACAATATTCATTACATTGTCAGATCGGTTCGAAGATCTGAAGCCAAGGATTTACTGGGAGATGATTGGGTACAACGACACAGGAGGATTGTGCAGCAGCACGCTAATCAATACAAGAGAAATGCCTGGGCAAAGATTCTTCAGTGCCTTTCTATTCAGGGCCTTACCTCCTCAGGTGGTGGAAGTGGTACTGCTGGTGGTGATGGTGCAACTGGAAGCAGCAGCGGTGCTTCAAGAGCAATTGTTAAAGACCGGTTTAAGGCATTCAATATTATGTTTGAGGAACTTCATCAGAAGCAATCTCAATGGACAGTTCCGGACACTGAGTTGCGAGAGTCTCTCAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCCTTTGTCAAACGATTTGGGCCACTAGTGGAGAGTGGAAAGAATCCTCAGAAGTACATCAAATACACTGCAGAAGATTTAGACCGCATGCTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACTAAACGATAA 1968 0.4187 MKMGIAVAGVDVLSEKAAMMRESLQKSQTIADNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLQAIENLRSNIQFFGSKKGFKSTDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSGSPHHEGDPSGKIPSNHHSESHNNNADAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTKNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGEACFGIREAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGNDSSQLASVTVRIMQALQTNLDGKSKQYKDLGLTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGATGSSSGASRAIVKDRFKAFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMSETKR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00987 655 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 647 IPR004140 GO:0000145|GO:0006887
Vian3g00987 655 MobiDBLite consensus disorder prediction 167 202 - -
Vian3g00987 655 Gene3D Exocyst complex component Exo70 77 181 - -
Vian3g00987 655 Gene3D Exocyst complex component Exo70 188 655 - -
Vian3g00987 655 SUPERFAMILY Cullin repeat-like 79 646 IPR016159 -
Vian3g00987 655 Pfam Exo70 exocyst complex subunit 281 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00987 Vian-Chr3 10859874 10867337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00987 10 655 EXO70 exocyst subunit family AT5G03540 75.037 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00987 K07195 - gmx:100813987 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00987 3 10859874 10867337 Vian3g00987 3 10859874 10867337 ECH