Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00973 ATGTCAGGAGAGGAAGTCTTATCATCCGACGAAGAACAATATGATATATCTCATCCTCCATTTGGTAACAAAAGTGGCTATAATTCAAGGACAGGCATCTACCACTCTCTAGTTAAGCTTCAAACTAAGCATGAAATCCCAACAAAGCCAGACCTCAACACTGCCCATTTTGTGCTGTCACAGTTCCCACAAGCACACCTTGCTGTGGCAAAAACTGCATTCATTGATGCAAGAACTAATCTGAGAGTTAGCTATAGTGAGCTGAGAAGGTCTACCTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGGTTAGGAAAGGTGATGTGGTTTTTTTATTGTCACCAAACTCAACCTTGTACTCAGCCATATGTCTAGCTGTGTTATCCGTTGGAGCAGTTCTGACCACTGCCAACCCCATCAACACTGCATCAGAAATTGCGAAACAAGTGCGTGATTCAGGTGCTAAACTAGCCATCTCAACACAAGAGGAACTGCACAAATTGGTCCCAACTGGGGTTCCTACGATTCTCACTTCTCGTTCTTCTGATGGCAGAAGGTTATCCGTTGAAGAGTTAATAGAAGGGACCACGGGAATAAGTAAAGATAAAGATGCTAAAGCTCATCCAGATTCATGTGGGAAGCTGATTCCAACATTTTCTGCAAAAGTTATAGACACTGAAACGGGGAAGCCTTTGCCCCCTAATAAAGAAGGAGAGTTGTGGTTAAAAAGTCCAACTATTATGAAAGGATATCTGGGAAATTTGGAGGCAACAAGTTCAACAATTGATTCAGAAGGTTGGTTGAGAACTGGTGATCTTAGTTACATTGATGATAATGGATTTGTTCACATAGTTGAACGGATAAAAGAGCTAATCAAGCACAACGGGTATCAGGTGGCTCCTGCAGAACTGGAGTCTGTGCTGCTAAGTCACCCTCTTATAGCTGATGCAGCAGTTATACCGTTGGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCTGGTTCTGAACTCTCAGAAGACCAAATCATTCAATTTGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTGAGAAAGGTGAGTTTCATTGACACTATTCCAAAGTCAGCTGCTGGCAAGATATTGCGGAAGGATCTTGTTTCACAAAGCAAATTTCAACCTGTCTCCAAGCTATGA 1194 0.4271 MSGEEVLSSDEEQYDISHPPFGNKSGYNSRTGIYHSLVKLQTKHEIPTKPDLNTAHFVLSQFPQAHLAVAKTAFIDARTNLRVSYSELRRSTYSLASALFHGLEVRKGDVVFLLSPNSTLYSAICLAVLSVGAVLTTANPINTASEIAKQVRDSGAKLAISTQEELHKLVPTGVPTILTSRSSDGRRLSVEELIEGTTGISKDKDAKAHPDSCGKLIPTFSAKVIDTETGKPLPPNKEGELWLKSPTIMKGYLGNLEATSSTIDSEGWLRTGDLSYIDDNGFVHIVERIKELIKHNGYQVAPAELESVLLSHPLIADAAVIPLEDEETGQIPMAYVVRAAGSELSEDQIIQFVAGQVAPYKKVRKVSFIDTIPKSAAGKILRKDLVSQSKFQPVSKL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00973 397 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 193 - -
Vian3g00973 397 Pfam AMP-binding enzyme 70 170 IPR000873 -
Vian3g00973 397 Pfam AMP-binding enzyme 197 294 IPR000873 -
Vian3g00973 397 Pfam AMP-binding enzyme C-terminal domain 304 379 IPR025110 -
Vian3g00973 397 Gene3D - 289 392 IPR045851 -
Vian3g00973 397 FunFam 4-coumarate--CoA ligase 2 291 391 - -
Vian3g00973 397 MobiDBLite consensus disorder prediction 1 23 - -
Vian3g00973 397 SUPERFAMILY Acetyl-CoA synthetase-like 70 195 - -
Vian3g00973 397 Gene3D Luciferase; Domain 3 210 288 - -
Vian3g00973 397 Gene3D - 43 194 IPR042099 -
Vian3g00973 397 SUPERFAMILY Acetyl-CoA synthetase-like 205 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00973 Vian-Chr3 10691005 10692949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00973 203 385 Monolignol Biosynthesis Gene Families AT1G20480 60.656 1.69e-75 243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00973 3 10691005 10692949 Vian3g00973 3 10691005 10692949 ECH