Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00971 ATGGCTTTTCCAATTCTCTTCCTTCTCTTCCTCTCCCTCCCATTCTCCTATGCAAAACTCAACGTTGATTACTACAAAGAAACATGTCCAGACTTTTCAAAAATCAACGCGCTCGAGCTTGCATGCCCTGGCATAGTTTCGTGTTCTGACATCGTGGCACAGGCCACGAGAGACCTTGTTAAGATGGTGGGTGGACCCTACTATCCCGTGAGGTTGGGGAGAAAAGACAGCTTGGAATCTGACGCTGCAAAAGTGGTTGAAAACCTTCCCACGCCCAACATGACCATGGACCAGATCATTGAGAAGTTCACCAAGAAGGGTTTCACGGTGAAAGAGATGGTGGCCATGACCGGCGCACACACCATAGGGTTCACTCACTGCAAGGAGTTCATCGGCAGGATCTACAACTTCAGCAAAACCTCCGATGCCGATCCCACCATGCACCCTAAACTGGTTGAAGGGTTGAGGTCAGTGTGCCATAACTACACCAGTGACCCTTCCATGGCTGCATTCAATGATATGAGGACACCAGGGAGGTTCGACAATGCTTATTTTCAGAATGTGATGAATGGATTGGGGCTCTTGACCTCTGACTCCTTGCTCGGTGTGGACCCTAGAACCAAGCCATATGTGGAACTGTACGCAAAAGATCAGCAAGCTTTCTTCAACGACTTTGTAAAAGCAATGGAGAAGCTTTCTGTCTTTCAAGTGAAAACTGGCAAGCAAGGAGAAGTCAGGTCCAGGTGCGACCAGTTCAACAACATTAATAGCGCCTAA 777 0.4826 MAFPILFLLFLSLPFSYAKLNVDYYKETCPDFSKINALELACPGIVSCSDIVAQATRDLVKMVGGPYYPVRLGRKDSLESDAAKVVENLPTPNMTMDQIIEKFTKKGFTVKEMVAMTGAHTIGFTHCKEFIGRIYNFSKTSDADPTMHPKLVEGLRSVCHNYTSDPSMAAFNDMRTPGRFDNAYFQNVMNGLGLLTSDSLLGVDPRTKPYVELYAKDQQAFFNDFVKAMEKLSVFQVKTGKQGEVRSRCDQFNNINSA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00971 258 ProSitePatterns Peroxidases proximal heme-ligand signature. 112 122 IPR019793 -
Vian3g00971 258 ProSiteProfiles Plant heme peroxidase family profile. 36 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 CDD secretory_peroxidase 37 252 IPR033905 GO:0004601|GO:0042744
Vian3g00971 258 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Haem peroxidase superfamily signature 64 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Haem peroxidase superfamily signature 112 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Haem peroxidase superfamily signature 46 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 SUPERFAMILY Heme-dependent peroxidases 36 253 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PANTHER - 36 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Plant peroxidase signature 171 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Plant peroxidase signature 227 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Plant peroxidase signature 64 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Plant peroxidase signature 187 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Plant peroxidase signature 111 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 PRINTS Plant peroxidase signature 45 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 FunFam Peroxidase 90 232 - -
Vian3g00971 258 Gene3D Peroxidase, domain 2 90 232 - -
Vian3g00971 258 Pfam Peroxidase 37 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00971 258 Gene3D - 36 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00971 Vian-Chr3 10672397 10673380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00971 37 256 Peroxidase AT5G47000 57.727 3.53e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00971 K00430 - gmx:100795676 379.022