Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00946 ATGTTGGAAATGGAGAAGGATTTTGATTCGAAGCTGAAGATTCAGGGGAATACCTCATCTTCCAATGGCGGAGGCAATGTCCAGAGATCCAAGAGCTTTGCTTTTAGGGCTCCTCAGGAGAATTACACTATCCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGATTGCCGATGCTTCTGCCTTTCCAGCTCCCTTAACTGCACGCTCCGTCTCTTACGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTCTATGCATTGAAGATCATGGATAAAAAGTTTATAACTAAGGAGAACAAAACAGCTTATGTGAAATTGGAACGCATTGTGCTAGATCAATTGGATCATCCAGGCATTGTGCGGTTATATTTCACATTTCAAGATTCATTTTCTCTATACATGGCACTTGAATCCTGCGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTAACTGAGGATGAGGCACGGTTCTATGCAGCTGAAGTTGTTGATGCTCTTGAATACATACATAGTTTGGGAGTCATACATCGTGATATTAAGCCAGAGAACTTGTTACTCACAGCTGACGGACACATTAAAATAGCAGATTTTGGGAGTGTGAAGCCTATGCAGGATAGTCAAATCACTGTCCTTCCAAATGCAGCGTCTGATGACAAAGCCTGCACTTTTGTGGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGCAATGACCTATGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGACGCAAGTGAATGGCTTATTTTTCAAAGAATTGTAGCAAGGGAACTTAGATTTCCAGATTACTTTTCTGATGAAGCAAGAGAGCTCATTGACCGTCTGTTGGATTTGGAACCCAGCAGGAGACCAGGTGCTGGACCTGATGGTTATGCTATTTTGAAAGCACACCCATTTTTCAAGGGAGTTGACTGGAAGAACTTGAGGGCACAAATTCCTCCAAAACTTGCTCCGGAACCTGGGACTCAGTCACCTGCAGCTGATGATGTTCATGATTCGTCATGGAGTCCTTCTCACATTGGGGATTGTCCCTCGGCTTCAGTTAGACAACCTGATGGTGCTACATCTTCTGATGGGTCTGGTCACATAACTAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAGTTTTTGGATCCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAACCAAAGTTGATCTATGTGGACCCATCAAAGCTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATCTAAGCATCCAAGTGACTACTGCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAAGATGCTAAGCAAAGAGCATGGCAGTGGAAGAAGGCAATTGAAGGACTTCAAAACCGGTGA 1530 0.4255 MLEMEKDFDSKLKIQGNTSSSNGGGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKIADASAFPAPLTARSVSYVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLTEDEARFYAAEVVDALEYIHSLGVIHRDIKPENLLLTADGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIVARELRFPDYFSDEARELIDRLLDLEPSRRPGAGPDGYAILKAHPFFKGVDWKNLRAQIPPKLAPEPGTQSPAADDVHDSSWSPSHIGDCPSASVRQPDGATSSDGSGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTTASNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00946 509 FunFam 3-phosphoinositide-dependent protein kinase 2-like 149 347 - -
Vian3g00946 509 Gene3D Phosphorylase Kinase; domain 1 75 148 - -
Vian3g00946 509 FunFam 3-phosphoinositide-dependent protein kinase 2-like 66 148 - -
Vian3g00946 509 Gene3D - 387 509 IPR011993 -
Vian3g00946 509 Pfam Protein kinase domain 76 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g00946 509 SUPERFAMILY Protein kinase-like (PK-like) 76 375 IPR011009 -
Vian3g00946 509 Coils Coil 489 509 - -
Vian3g00946 509 SMART serkin_6 47 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g00946 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Vian3g00946 509 MobiDBLite consensus disorder prediction 13 29 - -
Vian3g00946 509 MobiDBLite consensus disorder prediction 345 392 - -
Vian3g00946 509 FunFam 3-phosphoinositide-dependent protein kinase 1 380 509 - -
Vian3g00946 509 MobiDBLite consensus disorder prediction 1 29 - -
Vian3g00946 509 MobiDBLite consensus disorder prediction 370 392 - -
Vian3g00946 509 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 359 - -
Vian3g00946 509 Gene3D Transferase(Phosphotransferase) domain 1 149 351 - -
Vian3g00946 509 Pfam PH domain 406 508 IPR033931 -
Vian3g00946 509 SUPERFAMILY PH domain-like 326 508 - -
Vian3g00946 509 ProSiteProfiles Protein kinase domain profile. 47 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g00946 509 CDD STKc_PDK1 45 332 IPR039046 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00946 Vian-Chr3 10376530 10387866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00946 1 509 AGC Kinase Gene Family AT3G10540 78.824 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Vian3g00946 Pkinase 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00946 K06276 - gmx:100788780 930.243