Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00869 ATGAATAATTCTGTTTCAGAGAACAGTTTTATCATCGAGAGTGATGAAGAGGATATGGAGAAGGATTTGAACAAAGGTGGAGGTGATGGTAACGATTCTGATTCTTCTAGTTACTCAACTGAAAACCCTCCACAGAGAAAGCCCAGTTCTTACAACATCTCGTGGCCACAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACATCCTCATTGTCAAGACTAAGCAGTTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCCTTCAGTGACAAAGCCTCTTTTACAAGAACCAGAAGATGAGCAGCATCAGAGACGTAGCTCTCACACCTTGCTTCCTCCTCTTCCTTCTAGAAGATCTTCTTTGATTAAGAAGGACTCCAAGGTTTCTCATGAAGTTCCCTCTCATCACTGCTCTTTTGGACAAGCTGTGTTCAATGGCATAAACATTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGTTTGGGATCTCAGTCTTGTTTCTTTTTGCAATTATTTCATTTTATACTGGGCTGCTCTTGCGTTCCTGTTTGGACAGTGATCCTGAGCTTGAAACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCAATTTCAATAGTGTTGTACGTGGAATTATATGCTTGTTGCATTGAATATATAATTTTGGAGGGCGACAACTTGTCTTCCTTGTTTCCAAATGCACGCTTGAATTTGGGTGCAATTGAAATGGATTCACATACACTTTTTGCTGTGCTTACTGCCTTAACTGTTCTTCCTACTGTTTGGCTCCGTGATCTAAGAATTCTCAGTTACATATCTGCTGGTGGAGTTATTGCATCCATTTTGGTGGTTCTCTGCTTGTTATGGGTTGGAGTAGACAATGTAGGATTTCATAGCAAAGGGACAACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTATGGTTACTGCTACTCTGGACATGCTGTTTTCCCGAACATTTATTCATCCATGGCAAATAAAAACCAATTCCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTAGCTTATTGTATGCTGGAGCTGCTGTTATGGGATACACAATGTTTGGTGAAGCTGTACTCTCTCAATTCACTCTCAACCTGCCTCAAGAATTGGTAGCAACCAAGATTGCTGTTTGGACCACGGTGGTTAATCCATTAACCAAATTTGCATTGACTATATCTCCGGTGGCAATGAGTCTAGAGGAGTTGTTACCATCAAACCATGCCAAATCTTTTCTATATTGCTTCTTCATCAGAACAGGGTTGGTACTTTCCACCCTCGTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTCGTTATGTCATTGATTGGATCATTATTCACAATGCTTGTTTCTTTGATACTACCCTGCGTTTGTTTCCTGAAAATCTTGCGAGGCAAAGTGACACGATTGCAGGCAGCAGTTTGCGTTACAATCATCACAGTAGGAGTTGTCTGTTCTGCTTTTGGAACATACTCTGCCCTCTCCGAGATTATTAAGAGTTTGAGGGGATGA 1632 0.4161 MNNSVSENSFIIESDEEDMEKDLNKGGGDGNDSDSSSYSTENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTSSLSRLSSSFLSTSLTRRHTPEALPSVTKPLLQEPEDEQHQRRSSHTLLPPLPSRRSSLIKKDSKVSHEVPSHHCSFGQAVFNGINILCGVGILSTPYAAKEGGWFGISVLFLFAIISFYTGLLLRSCLDSDPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPNARLNLGAIEMDSHTLFAVLTALTVLPTVWLRDLRILSYISAGGVIASILVVLCLLWVGVDNVGFHSKGTTLNLATFPVAVGLYGYCYSGHAVFPNIYSSMANKNQFPGVLLACFGICSLLYAGAAVMGYTMFGEAVLSQFTLNLPQELVATKIAVWTTVVNPLTKFALTISPVAMSLEELLPSNHAKSFLYCFFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLFTMLVSLILPCVCFLKILRGKVTRLQAAVCVTIITVGVVCSAFGTYSALSEIIKSLRG 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00869 543 MobiDBLite consensus disorder prediction 1 53 - -
Vian3g00869 543 Pfam Transmembrane amino acid transporter protein 154 533 IPR013057 -
Vian3g00869 543 FunFam Amino acid transporter AVT1A 152 540 - -
Vian3g00869 543 MobiDBLite consensus disorder prediction 29 53 - -
Vian3g00869 543 PANTHER OS05G0424000 PROTEIN-RELATED 161 521 - -
Vian3g00869 543 MobiDBLite consensus disorder prediction 100 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00869 Vian-Chr3 9329488 9335811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00869 1 476 Amino Acid or Auxin Permease AAAP Family AT2G39130 69.421 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00869 K15015 - gmx:100775840 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00869 3 9329488 9335811 Vian3g00869 3 9329488 9335811 ECH