Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00866 ATGTGTAGGTGGAGCACCAATTCAAAGCATTTGTGGGTGTCCATTGTGCTTTTCAGCTTGTTCCTCTGGATGACGCAGTTGCAGTGCCAACAAATGAATGACTATGACCAAATTGATAGCCCTGCCGTTCTTCCCCTCGTCACTCAGCTTGTGTACAGTCAAATCTCCAATTTGACATCAATCATCAGCCAGGAAATTAGCAGGGAGTCCACTTTCTGTGTCAAAGATCCGGATGCTGATTGGAATCAAGCATTTAATTTTTCAACAGATTTGGACTTCTTGGCATCTTGCATTAAGAAGACTAGAGGAGATATTGCAAAACGTTTGTGTACAGCAGCAGAAGTGAAGTTTTTATTGGATAGTTTATTGGCGAAATCCTTAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCGTGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGATCTCTCAAGCCAGAAGGTTGATCTTAAAAATTCCAAGGAGATACCTGCAAGAACTTCAAACTGTCAACCATGTTGTGAAGGCTTCTTTTGTCCTCATGGTATCACATGCATGATACGTAAATATCTTTATCAGCTGCCTCCAATGCAGCCAAATCATACCTGTGGTGGAGCAAATGTTTGGGCTGACGTTAGTAGCAGTAGTGACATATTTTGCTCAGCTGGATCGTATTGTCCAACCACCACAAAAAGAATTTCTTGCAGTAGTGGGATGGGTTCCACATCCGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACAGCAACCCAAAATATGCGTGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAATTGTTCTGACCAAGTTCTCACTACTAGGGAAAGAAGAGTAGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACTGCAAATGCGCGCCAAAGATGGCAATTTGCAAAAGATGCAACTAAGAAGGGTGCAGTGGGGCTGCAAGCTCAACTATCTCGCACCTTCAAGAAGGATGCAGCAAATCTGGAAAAATTTAAAATTCTGAAACAAGCAAATTCTGAAGCAGACGTTGAATTGTTATCACATCCACGACCTAAAACTTCAAGCATGGTTGCAAGTTCATCTGTGGCAACAAATAAAAAGGGAAAAGAACCCAGTGGTCTGATGCAGATGATACACGAAATTGAAAATGATCCTGATATTGATGATATTGAAAATGATCCTGATACAGAAATAGAAACTAGAGGTAAAAGTGTCACAGCAAATGTGTCAAAGGGAAAACAACCACATACTCATAGCCAAATTTTTAAGTATGCATATTCTCAGCTTGAAAAAGAGAAAGCTCAGCAAAAAGAAAACAAGAAGCTTACCTTCTCGGGGGTAATTAAAATGGCGACAAACACTGAAAGAAGGAAAAGGCCTTTAATTGAAATTTCTTTCAAGGATCTGACTCTTACATTGAAAGCTCAAAACAAGCATATATTGAGATATGTTACCGGGAAAATTAAACCTGGCCGCATCACAGCTGTCATGGGTCCATCAGGGGCCGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGCATTAGGATGCTCGGTCACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATCCATTCCTTTAAGAAAATTACTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTAACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAGGCTATCTGTTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTCGAAAGAGTTATTGAATTCTTGGGGCTTCAATCAGTGCGTAATTCCTTGGTTGGAACTGTGGAAAAGCGAGGGATCTCTGGAGGCCAAAGGAAGCGTGTAAACGTTGGATTGGAAATGGTTATGGAACCTTCACTATTGATCTTGGATGAACCCACATCTGGCTTAGACAGTGCATCTTCTCAGCTGCTTCTAAGAGCACTAAGACGCGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTACAAGATGTTTGATGACCTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATCACGGATCTGCAAAGAAAGTTGAAGAATACTTTTTGGGCCTGGGGATCAACATTCCAGAGCGGATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCCTGACAACACCTGGTGGAAGCTCAGGACTTAGTTACAAGGACCTGCCAGTTAGATGGATGCTTCATAACGGATATCCAATACCTCTTGACATGAGGCAGAATGCGGTTCAATATGATATGTCACACAGTGTAAATTCAGCTAATGAAATTGATCCCCATGGATCCGGTCATGCAGACAAAACCTTTGCTGGAGAATTATGGCAAGACATGAGAAACAATGTGGAACTGAGGGGGGAGAAGATAAGACACAATTTTTTTAAATCCAAGGATTTATCTGACCGGAAAACTCCTGGCGTTTTCAAGCAATATAAGTATTTTCTTATACGGGTTGGGAAGCAGCGTTTACGAGAAGCTAGGATGCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTAGGATCACTTACAAAAGGCAGTGAGCAAACGTTTGGTGCAGCTGGTTACACCTATACGGTGATTGCTGTATCTCTTCTGTGCAAAATAGCGGCCTTGAGATCATTTTCCTCGGAAAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGTTTGGCTTATTTTCTCTCTAAAGACACCCTAGATCATTTTAACACAGTGATTAAACCTGTGGTGTACCTTTCTATGTTCTATTTCTTCACCAATCCGAGATCAACTTTTGCAGATAATTATATTGTGCTGCTTTGTCTTGTGTACTGTGTTACTGGTATAGCATATGCACTGTCCATATTTTTTGAACCTGGTGCTGCCCAGTTATGGTCAGTACTTCTTCCCGTTGTTTTAACTCTCGTTGCAACACAACGAAAAGATACTAAAATTTTGAAGGATATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTAGTTGTTTCAAATGCTGAAAGGTATCAGGGGGTGTGGCTCATAACTCGTTGTGGTTCACTTTTGAAAAGTGGCTACAATCTTCATGATTGGAGTTTGTGCATATCCATCCTCATTCTTATGGGTGTAATTGGCCGAGCTATAGCATTTTTCTGCATGGTAACCTTCCGAAAGAAGTAA 3285 0.4119 MCRWSTNSKHLWVSIVLFSLFLWMTQLQCQQMNDYDQIDSPAVLPLVTQLVYSQISNLTSIISQEISRESTFCVKDPDADWNQAFNFSTDLDFLASCIKKTRGDIAKRLCTAAEVKFLLDSLLAKSLSANYLKPNKNCNLTSWVSGCEPGWACSDLSSQKVDLKNSKEIPARTSNCQPCCEGFFCPHGITCMIRKYLYQLPPMQPNHTCGGANVWADVSSSSDIFCSAGSYCPTTTKRISCSSGMGSTSEKRCFKLSSCNSNTATQNMRAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARKTANARQRWQFAKDATKKGAVGLQAQLSRTFKKDAANLEKFKILKQANSEADVELLSHPRPKTSSMVASSSVATNKKGKEPSGLMQMIHEIENDPDIDDIENDPDTEIETRGKSVTANVSKGKQPHTHSQIFKYAYSQLEKEKAQQKENKKLTFSGVIKMATNTERRKRPLIEISFKDLTLTLKAQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKALGCSVTGSILINGRNESIHSFKKITGFVPQDDIVHGNLTVEENLWFSAQCRLSVDLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALYKMFDDLILLGKGGLTVYHGSAKKVEEYFLGLGINIPERINPPDYFIDILEGLTTPGGSSGLSYKDLPVRWMLHNGYPIPLDMRQNAVQYDMSHSVNSANEIDPHGSGHADKTFAGELWQDMRNNVELRGEKIRHNFFKSKDLSDRKTPGVFKQYKYFLIRVGKQRLREARMQAIDYLILLLAGACLGSLTKGSEQTFGAAGYTYTVIAVSLLCKIAALRSFSSEKLHYWRESDSGMSSLAYFLSKDTLDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALSIFFEPGAAQLWSVLLPVVLTLVATQRKDTKILKDIANLCYSKWALQALVVSNAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVIGRAIAFFCMVTFRKK 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00866 1094 MobiDBLite consensus disorder prediction 373 393 - -
Vian3g00866 1094 FunFam ABC transporter G family member 24 481 723 - -
Vian3g00866 1094 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 450 1081 - -
Vian3g00866 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 717 IPR027417 -
Vian3g00866 1094 CDD ABCG_EPDR 485 711 - -
Vian3g00866 1094 Gene3D - 485 720 IPR027417 -
Vian3g00866 1094 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 487 729 IPR003439 GO:0005524
Vian3g00866 1094 MobiDBLite consensus disorder prediction 375 390 - -
Vian3g00866 1094 Pfam ABC-2 type transporter 685 1094 IPR043926 GO:0140359
Vian3g00866 1094 ProSitePatterns ABC transporters family signature. 628 642 IPR017871 GO:0005524|GO:0016887
Vian3g00866 1094 Pfam ABC transporter 506 656 IPR003439 GO:0005524
Vian3g00866 1094 SMART AAA_5 513 705 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00866 Vian-Chr3 9284908 9292996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00866 482 688 Calmodulin-binding Proteins AT2G36910 27.358 1.43e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00866 - - gmx:100775464 1876.29