Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00862 ATGAAGACCAAACATCTCATGTGCTGCATAAGGGAATTTTCTAAATTCAGAAAGGTGAGAGTTAATTTTCCGAAATGTGAAACGCTGGAGCACATGCGAATGTTTCTTTCTTGTTGTACGAAGTCACACTCGTACGTTCCCAAAGATGTTCCGAAGGGTCACCTAGTTGTCTACGTTGGTGAGGATTGCAAGAGATTTGTGATCAAAGTAGGCATACTCAACCATCCATTGTTCCAAGTCTTGCTGGACCATGCAGAGGACGTTTTTGGATTCAATAATGCTTCCAAACTTCATATCCCTTGCAACGAGAACATTTTTCTTCACGTTCTTCATATTGCTCAGGATCAAACGCTCTCTCGTTGCTTCTAG 369 0.4173 MKTKHLMCCIREFSKFRKVRVNFPKCETLEHMRMFLSCCTKSHSYVPKDVPKGHLVVYVGEDCKRFVIKVGILNHPLFQVLLDHAEDVFGFNNASKLHIPCNENIFLHVLHIAQDQTLSRCF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00862 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 109 IPR003676 GO:0009733
Vian3g00862 122 Pfam Auxin responsive protein 38 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00862 Vian-Chr3 9241649 9242017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00862 47 110 Calmodulin-binding Proteins AT3G43120 48.438 1.78e-17 72.0