Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00839 ATGGGAGAAGAAGTTTTACAGAGGAAGTTGGAGACAACTCCTACATGGGCTGTTGCAATTGTGTGCTTTGTCATGCTCGCTATTTCAATCCTCATTGAACATATTATTGAAGAACTTGGAAAGTGGTTGAAAAAGAAACACAAAAAGGCTCTTCATGAAGCGCTGGAAAAGGTTAAAGGAGAGCTTATGCTGCTGGGATTCATATCCTTGCTCCTAGTGGTGTTTGAAGATCGAATTACCTCTATCTGCATCTCAGAAAGTCTTGCTTCCACTTGGAATCCTTGCGATCCTGATTATAAGAGTAAAGGTCCAGAAGGATATATTGACAAATGCGCACAAAAAGATAAAGGAAAAGTTGCTTTTATCTCTGAATATGGGATTCACCAGCTCCATATATTCGTCTTTGTGCTTGCTATCTTTCACATCCTACAGTGCATCATGACACTGACTTTGGGTAGAACTAAGATGTCAATATGGAGGAAGTGGGAAGACGAAACGAAGAGTCTTGAACATCAGTTCTACCATGATCCTGAGAGGTTCAGGTTTGCTAGGGATACAACGTTTGGACGAAGGCACTTGAACTCATGGAGTAAATCACCAATTTTATTATGGATAATTAGCTTCTGCAGACAATTCTATGGATCAGTTAATAAGGTTGACTATATGGCATTACGACATGGATTCATAGTGGCACATTTGACTCCAGCAAGTGAGACGAAATTTGACTTCCAGAACTATATCAAGAGAACACTTGATGAGGATTTTGCAGTAGTTGTGGGAATAAGTCCAACTATTTGGTTCTTTGCAGTGCTAATTCTGCTCACAAATACTAATGGATGGTATTCTTATTTGTGGCTACCATTTATCCCACTAATTATAATCTTGTTGGTGGGAACAAAGCTACAAATGATCATAACAGATATGGCACTAAGGATTCAAGATAGGGGGGAAGTGGTCAAGGGTGCACCAGTGGTTGAGCCAGGAGATGAATTGTTCTGGTTCAGTCGCCCTCGCCTCGTTCTCTTTCTGATTCATCTCGTTCTATTTCAGAATGCATTTCAATTGGCGTTTTTTGCTTGGAGCACATACGACAACAAGTTCAAAATAAACAATTGCTTTCACCGAACTACTGAAGATATCGTCATCAGACTTACAATGGGGGTTCTCACCCAAGTTCTATGCAGCTACGTTACTTTGCCTCTTTATGCTCTAGTCACACAGATGGGTTCTACGATGAAACCCACCATTTTCAAAGATAACGTGGCATCAGCACTAAAGAACTGGCATCACACTGCTAAAAAGCATCTAAAACACAACAAGGATTCGACTTCTAACACCCCATTCTCAAGCAGACCAGGAACTCCAACTCATGGCATGTCTCCGGTGCACTTGCTTCACATGCACCCTAGACACAGTGATAGTCCACTGGTTTCTCCAAGAGCATCCAATTATGAAAATGGTCAATGGGATGTTGAAGGGTCACATTCCCCAAGCCACCATGCAAGAGATGTTGACCATGAAGAGACCATGATGATGCAGCCTCCAGCAGCAGAATTGCCTCCTACGGGACCCAATCCTATTCGAACTCAACATGAAATCAACATTGCTTTATCTGAATTTTCATTTGGGAGGGGACGCAACCCTGGTAGATCAGATGAGTATTAG 1665 0.4174 MGEEVLQRKLETTPTWAVAIVCFVMLAISILIEHIIEELGKWLKKKHKKALHEALEKVKGELMLLGFISLLLVVFEDRITSICISESLASTWNPCDPDYKSKGPEGYIDKCAQKDKGKVAFISEYGIHQLHIFVFVLAIFHILQCIMTLTLGRTKMSIWRKWEDETKSLEHQFYHDPERFRFARDTTFGRRHLNSWSKSPILLWIISFCRQFYGSVNKVDYMALRHGFIVAHLTPASETKFDFQNYIKRTLDEDFAVVVGISPTIWFFAVLILLTNTNGWYSYLWLPFIPLIIILLVGTKLQMIITDMALRIQDRGEVVKGAPVVEPGDELFWFSRPRLVLFLIHLVLFQNAFQLAFFAWSTYDNKFKINNCFHRTTEDIVIRLTMGVLTQVLCSYVTLPLYALVTQMGSTMKPTIFKDNVASALKNWHHTAKKHLKHNKDSTSNTPFSSRPGTPTHGMSPVHLLHMHPRHSDSPLVSPRASNYENGQWDVEGSHSPSHHARDVDHEETMMMQPPAAELPPTGPNPIRTQHEINIALSEFSFGRGRNPGRSDEY 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00839 554 PANTHER MLO-LIKE PROTEIN 1 7 501 IPR004326 GO:0006952|GO:0016020
Vian3g00839 554 MobiDBLite consensus disorder prediction 432 501 - -
Vian3g00839 554 MobiDBLite consensus disorder prediction 476 493 - -
Vian3g00839 554 MobiDBLite consensus disorder prediction 442 456 - -
Vian3g00839 554 Pfam Mlo family 8 467 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00839 Vian-Chr3 8841810 8846602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00839 5 544 MLO family AT2G39200 58.562 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00839 K08472 - gmx:100816112 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02344 2 43793074 43800747 Vian3g00839 3 8841810 8846602 ECH
Vian3g00839 3 8841810 8846602 Vian3g00839 3 8841810 8846602 ECH