Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00817 ATGGGGGAATCCAATGTTGTTAGCAAGAATAGCCTCTATACTACTTGTCCTAAAAAATGTGATGAAGATGCTCGTGTATCTGCAATGCTGCTTAGTACTGCTGTGGTGTATCCTGCAGTTCTGAATGCTGCTATTGAGCTCAACTTGTTTGAGATCATAGCCAAGGCAACACCACATGGTTCACTCGTGTCATCTCATGAAATTGCTTCTAAGCTCCTAAACCAGCACCCTGACTTGCCCAATAGGCTTGATCGCATGCTGCGTTTGCTTGCTAGTTATTCTGTTCTTACCACTTCAACACGCACCACACAACATGGTGCCACTGAGACAGTTTATGGACTCTCACAAATTGGACAATACTATGCCCCTGATGCAACTAGAGGCTACTTCGCTTCTTTTGCATCCTTTCTCTCTTGTCCTGCACTCTCACCACTTTGGCTGAATTTCAAGGAAGCGGTGGTTGATGCAGACGTTGATTTGTTCAAGAAACTTCATGGGGTAACAACGTACCAGTACATGGAAAAGAATCCAAAAATGAACGAAATTTTTAACAAGTCTATGGCGGATTTGTGCGTAACAGATATGAATAGAATACTTGACATATATAATGGATTTGAGGGAATATCAACGTTGGTCGATGTAGGAGGTGGAAATGGACAAAACCTGAAAATGATAGTCTCCAAATACCCTTCAATGAAAGGAATTAATTTTGATCTGCCCCAAGTCATTGAGAATGCACCACTGCTATCAGGGGTTGAGCATGTTGGAGGAGATATGTTTGCAAGTGTTCCAGAAGGTGACGCCATGACACTAAAGCTTGTTTCGAGCCTGGACAACCTTATGTTTATCACAGCAGGTGGAAAGGAAAGAACTGAGAAAGAGTACGAGAATTTGTGCAAGCTGGCTGGTTTTTCAAAATTTAATGTTGCTTGTCATGCGTCGTCTGGGCCGGGAGTGATGGAATTCTACAAATAG 975 0.4267 MGESNVVSKNSLYTTCPKKCDEDARVSAMLLSTAVVYPAVLNAAIELNLFEIIAKATPHGSLVSSHEIASKLLNQHPDLPNRLDRMLRLLASYSVLTTSTRTTQHGATETVYGLSQIGQYYAPDATRGYFASFASFLSCPALSPLWLNFKEAVVDADVDLFKKLHGVTTYQYMEKNPKMNEIFNKSMADLCVTDMNRILDIYNGFEGISTLVDVGGGNGQNLKMIVSKYPSMKGINFDLPQVIENAPLLSGVEHVGGDMFASVPEGDAMTLKLVSSLDNLMFITAGGKERTEKEYENLCKLAGFSKFNVACHASSGPGVMEFYK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00817 324 PIRSF O-mtase 274 324 IPR016461 GO:0008168
Vian3g00817 324 PIRSF O-mtase 7 278 IPR016461 GO:0008168
Vian3g00817 324 Gene3D Vaccinia Virus protein VP39 274 312 IPR029063 -
Vian3g00817 324 Gene3D Vaccinia Virus protein VP39 123 273 IPR029063 -
Vian3g00817 324 PANTHER O-METHYLTRANSFERASE 28 274 IPR016461 GO:0008168
Vian3g00817 324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 312 IPR029063 -
Vian3g00817 324 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 324 IPR016461 GO:0008168
Vian3g00817 324 FunFam Caffeic acid 3-O-methyltransferase 8 121 - -
Vian3g00817 324 SUPERFAMILY "Winged helix" DNA-binding domain 21 124 IPR036390 -
Vian3g00817 324 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Vian3g00817 324 Gene3D - 5 121 IPR036388 -
Vian3g00817 324 Pfam O-methyltransferase domain 146 274 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00817 Vian-Chr3 8621701 8623290 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00817 21 313 Monolignol Biosynthesis Gene Families AT5G54160 40.882 8.85e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00817 - - gmx:100787536 486.108