Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00814 ATGGGGGAATCCAGTGTTAGCACAACTTGTCCTAAAAAATGTGATGAGGATGCTCGTGTATCTGCAATGTTGGTTAGTACTACTGTGGTGTACCGTGCAGTTCTGAATGCTGCTATTGAGCTCAACCTGTTTGAGATCATAGCCAAGGCAACACCAAACGGTTCATTCATGTCATCTCATGAAATTGCTTCTAAGCTCCCAAACCAGCATCCTGACTTGCCCGATAGGCTTGATCGCATGCTGCGTTTGCTTGCTAGTTATTCTGTTCTTACCACTTCAACACGCACCACACAACACGGTGCCACTGAGACAGTTTACGGACTCTCACAAATTGGACAATACTATGCCCCCGATGCAACTAGCGGCTACTTCGCTTCTTTTGCATCCTTTCTCTCTTGTCCTGCACTCTCACCACTTTGGCTGAATTTCAAGGAAGCAGTGGTTGATGCAGACGTTGATTTGTTCAAGAAACTTCATGGGATAACAAAGTACCAGTACATGAAAAAGAATCCAAAAATGAACGAACTTTTTAACAAGACTATGGCGGATTTGTGTGCAACAGATATGATTAGAGTACTTGAAATATATAATGGATTTGAGGGAATATCAACGTTGGTTGATGTAGGAGGTGGAAATGGACAAAACCTGAAAATGATAGTCTCCAAATACCCTTCAATGAAAGGAATTAATTTTGATCTGCCCCAAGTCATTGAGAATGCACCACTGCTATCAGGGGTTGAGCATGTTGGAGGAGATATGTTTGCAAGAGTTCCAGAGGGTGACGCCATGACACTAAAGCTTTTTTCCTGCCTCGACAACCTTATGTTTATCACAGCAGGTGGAAAGGAAAGAACTTTGAAACAGTACGAGAATTTGTGCAAGCTGGCTGGTTTTTCAAAATTTCATGTTGCTTGTGATGCCTCCTGGCCGGGAGTGATGGAATTCTACAAATAG 954 0.4287 MGESSVSTTCPKKCDEDARVSAMLVSTTVVYRAVLNAAIELNLFEIIAKATPNGSFMSSHEIASKLPNQHPDLPDRLDRMLRLLASYSVLTTSTRTTQHGATETVYGLSQIGQYYAPDATSGYFASFASFLSCPALSPLWLNFKEAVVDADVDLFKKLHGITKYQYMKKNPKMNELFNKTMADLCATDMIRVLEIYNGFEGISTLVDVGGGNGQNLKMIVSKYPSMKGINFDLPQVIENAPLLSGVEHVGGDMFARVPEGDAMTLKLFSCLDNLMFITAGGKERTLKQYENLCKLAGFSKFHVACDASWPGVMEFYK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00814 317 Gene3D - 2 115 IPR036388 -
Vian3g00814 317 SUPERFAMILY "Winged helix" DNA-binding domain 16 118 IPR036390 -
Vian3g00814 317 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Vian3g00814 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 316 IPR029063 -
Vian3g00814 317 PANTHER O-METHYLTRANSFERASE 25 266 IPR016461 GO:0008168
Vian3g00814 317 Gene3D Vaccinia Virus protein VP39 117 268 IPR029063 -
Vian3g00814 317 Pfam O-methyltransferase domain 140 266 IPR001077 GO:0008171
Vian3g00814 317 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 317 IPR016461 GO:0008168
Vian3g00814 317 PIRSF O-mtase 3 270 IPR016461 GO:0008168
Vian3g00814 317 PIRSF O-mtase 267 317 IPR016461 GO:0008168
Vian3g00814 317 Gene3D Vaccinia Virus protein VP39 269 306 IPR029063 -
Vian3g00814 317 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00814 Vian-Chr3 8574109 8575667 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00814 1 317 Monolignol Biosynthesis Gene Families AT5G54160 38.356 1.95e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00814 - - gmx:100787536 459.144