Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00806 ATGGCAAACTCTCCCAAAGAAGGAGAGGATGAGGCTTTCGTTTGTGCTTTTTTACTTTGCACTAATTATGTGTTTCCTTCAGTGTTCAATGCTGCTATTGAGCTTAAATTGTTTGAAATCATAGCAAAGGCACCACCACCAAATGCAGCAATGCCAAATTTTAAGGATGTGATAATTGATTCCGAGTACGACCTATGCAAGAAGGTTCATGGAATGCCTTTCTACCAATGCACTGAAAGAGATCCACAACTGAATTATATTTTCAACAGATCAATGGCTAATATTTGCGACATAGAAATGAATAAGATTCTTGATGAATATAAAGGATTTGAAGGAGTGTCAACTCTTGTTGATGTGGGAGGTTGTACAGGGCAAACTCTCCACATGATAATCTCCAAGTACTCTACAATTAAGGGTATTAATTTTGACTTGCCCCAAGTAGTCGAAAAAGCAGCATCTTACCCAGGGATACAGCATGTTGGAGGAGATATGTACCATTATGTGCCAAAGGGTGATGCTATGATTCTAAAGACTGTGTTGCACAATTGGTCAGATGAAGACTGCTTAAGCATTTTGAGGAACTGTCACAATGCACTGCCACAGAATGGAAAGGTGATTGTGATAGAATTTATAGCACCAGAAGAAGCATCAGAGTCGAATGTATCAAAGCTTGTTTCCACCCTCGACACCATCATGTATATCACAAGTGGTGGGAAGGAAAGAAGTGAAAAGGAGTACGAGAAATTGTGCACGCTTTCTGGATTCTCAAGATTTGAAGTTGTCTGCCGTGCATTTACTGTCTTAGGAACCATGGAATTTCACAAATGA 828 0.3961 MANSPKEGEDEAFVCAFLLCTNYVFPSVFNAAIELKLFEIIAKAPPPNAAMPNFKDVIIDSEYDLCKKVHGMPFYQCTERDPQLNYIFNRSMANICDIEMNKILDEYKGFEGVSTLVDVGGCTGQTLHMIISKYSTIKGINFDLPQVVEKAASYPGIQHVGGDMYHYVPKGDAMILKTVLHNWSDEDCLSILRNCHNALPQNGKVIVIEFIAPEEASESNVSKLVSTLDTIMYITSGGKERSEKEYEKLCTLSGFSRFEVVCRAFTVLGTMEFHK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00806 275 Gene3D - 68 103 IPR036388 -
Vian3g00806 275 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 265 IPR029063 -
Vian3g00806 275 Gene3D - 1 52 IPR036388 -
Vian3g00806 275 Gene3D Vaccinia Virus protein VP39 85 264 IPR029063 -
Vian3g00806 275 PANTHER O-METHYLTRANSFERASE 65 258 IPR016461 GO:0008168
Vian3g00806 275 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 275 IPR016461 GO:0008168
Vian3g00806 275 Pfam O-methyltransferase domain 55 256 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00806 Vian-Chr3 8491574 8492877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00806 53 267 Monolignol Biosynthesis Gene Families AT5G54160 51.389 2.05e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00806 - - gmx:100798347 308.531