Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00797 ATGGGAATTTCTTCACACCCTTCTCTTGTCTCCCTCTCTTTGAAGGATCTGCTTGAGGGAACTGAAGCAAACAGAAATTCATCATACGGGTGTTTGAGGACCAAAAAGAAGGGTGTTATTAGGAGGCCAAGGAGGGTTTTGATGAAGAGAAGGGGTGGTTGTAGAAGAGGATCAAATGGGATTCGGAGACGCGTGAGAACATTGAAGACCCTTGTACCTAACTCTGATTCTTTGGGGTTGGATGGACTCTTCAGAGAAACTGCTAATTACATATTGTCCTTACAAACGAGAGTGAGGGTCATGCAGGTTATGGTTAAGCTACACAAACATTGGTTTCAGATTCCATGTTCTTTGTCTCCTGCATCTAGATTTAGATCAGTTTTATGA 387 0.4264 MGISSHPSLVSLSLKDLLEGTEANRNSSYGCLRTKKKGVIRRPRRVLMKRRGGCRRGSNGIRRRVRTLKTLVPNSDSLGLDGLFRETANYILSLQTRVRVMQVMVKLHKHWFQIPCSLSPASRFRSVL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00797 128 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 35 107 IPR044660 GO:0006355
Vian3g00797 128 CDD bHLH_AtIBH1_like 50 105 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00797 37 107 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 52.778 3.06e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00797 - - vum:124832498 190.274