Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00786 ATGGACTCTCTCTCTGCCACCAAACACCACAACAATCTCCCCAAGCCTTCCTCCCTCCACATGGAGGCTCCGCCGCCGGAGCCCAGTCCTCTCCGGAAGATCATGGTTGTGGCATCCATTGCCGCAGGGGTGCAGTTCGGCTGGGCCCTTCAGCTCTCCCTCCTCACCCCATACGTCCAGCTCTTGGGAATTCCCCACACTTGGGCCTCCTTCATCTGGCTCTGCGGCCCAATCTCCGGCATGCTGGTCCAGCCCATCGTCGGCTACCACAGCGACCGCTGCACTTCCCGCTTCGGCCGCCGTCGCCCCTTCATCGCCGCCGGAGCCCTGGCCGTTGCCATCGCCGTCTTTCTCATAGGCTACGCTGCCGACCTCGGCCACATTTTCGGCGACTCCCTCGCCAAGAAAACCCGCCCACGCGCCATCGCCATCTTCGTCGTCGGCTTCTGGATCCTGGACGTGGCCAATAACATGCTCCAGGGCCCCTGCCGTGCCCTCCTCGCCGACCTCTCCGCCGGCGACCACCGCAAGACGCGCAACGCAAACGCCTTCTTCTCCTTCTTCATGGCCGTGGGCAACGTCCTGGGGTACGCCGCGGGGTCCTACAGCGGCCTCCACCACGTCTTCCCCTTCACCAAAACTAAAGCCTGCGACGTCTACTGCGCCAATCTGAAAAGCTGCTTCTTCCTATCCATAGCGCTCCTCCTCAGTCTGGCCACCATCGCCCTCATTTACGTGAAGGAGAACACGGTGCCGTCGGAAAAAAGCACCGCGAGCGTTGCGGAAGAAGATGGGTCCCACGGGGGCATGCCCTGTTTTGGGCAGTTATTCGGTGCGTTTCGGGAACTGAAGCGTCCCATGTGGATCCTTCTCTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCCTTCCTTCTCTTCGACACCGACTGGATGGGCCATGAGGTCTACGGTGGAACCGTCGGAGAAGGAAAGGCCTACGATAGAGGCGTGCGCGCCGGTGCGTTAGGTCTCATGTTGAACTCTCTGGTCCTCGGAGCCACTTCCTTGGGCGTCGATGTCCTCGCGCGTGGAGTCGGGGGCGTCAAGAGGCTCTGGGGAATTGTCAACTTCCTTCTCGCTGTCTGTTTGGCCATGACCGTTTTGGTCACCAAGATGGCCCAGCATTCTCGCCAGTACACTGACCTCCCCGGCGGCATCCACGAGCCCCTCCCTCCTCCCTCCGGCGTCAAAGCCGGCGCGTTGGCCCTCTTTTCCGTCCTCGGAATCCCTCTCGCGATTACTTACAGCATACCCTTTGCTCTGGCGTCAATATTCTCCACCACCTCAGGGGCAGGACAAGGGTTATCTCTCGGAGTCCTCAATCTTGCAATCGTCATACCACAGATGGTGGTGTCTGTGATCAGTGGACCATGGGATGATCTATTTGGCGGCGGTAACTTGCCGGCGTTCGTGGTGGGTGCGGTGGCGGCTGCGGCCAGTGGCATTCTATCCCTAATCCTGCTGCCATCTCCACCGCCGGATTTGGCGAAAACTGCAACCGCAGCTGGGGGAGGGTTCCATTAA 1566 0.606 MDSLSATKHHNNLPKPSSLHMEAPPPEPSPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWASFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADLGHIFGDSLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKTRNANAFFSFFMAVGNVLGYAAGSYSGLHHVFPFTKTKACDVYCANLKSCFFLSIALLLSLATIALIYVKENTVPSEKSTASVAEEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGHEVYGGTVGEGKAYDRGVRAGALGLMLNSLVLGATSLGVDVLARGVGGVKRLWGIVNFLLAVCLAMTVLVTKMAQHSRQYTDLPGGIHEPLPPPSGVKAGALALFSVLGIPLAITYSIPFALASIFSTTSGAGQGLSLGVLNLAIVIPQMVVSVISGPWDDLFGGGNLPAFVVGAVAAAASGILSLILLPSPPPDLAKTATAAGGGFH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00786 521 MobiDBLite consensus disorder prediction 1 26 - -
Vian3g00786 521 Pfam MFS/sugar transport protein 42 300 - -
Vian3g00786 521 NCBIfam sucrose/proton symporter 30 507 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vian3g00786 521 CDD MFS_SLC45_SUC 34 481 - -
Vian3g00786 521 Gene3D MFS general substrate transporter like domains 28 515 IPR036259 -
Vian3g00786 521 PANTHER SUGAR TRANSPORTER 31 501 - -
Vian3g00786 521 FunFam Sucrose transport protein 28 502 - -
Vian3g00786 521 SUPERFAMILY MFS general substrate transporter 32 506 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00786 Vian-Chr3 8284520 8287093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00786 27 521 Sucrose Transporter Gene Family AT1G22710 70.120 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00786 K15378 - gmx:547679 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00815 8 17775043 17784365 Vian3g00786 3 8284520 8287093 PCT