Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00773 ATGGGGTTACCTTCCTCATCATTAGACACTAGCTGGTGGGTGTTTACACTTCCAGCCATAGCAGGAACACAAAACTTAACTCACAACCCACTCTTGCTCATAATCCTCACTGCAATTCTTTCCATTGCCCTTCTGGCGTGGGCCTTCCCAAGAGGGGGAGGAGGTCTTGCATGGAGAAACGGAAAGAACCAAATGGGCCGGGTTCCTGTACCCGGGCCCAAAGGAGTCCCTTTCTTCGGCCTCTTGTTTAGCTTAAACCATGCCCTACCTCATCGCACCCTCGCTTCCATTGCTTCAGCCCTATCCGCCACGAAACTCATGGCCTTCAGTTTGGGGTCAAGCCCAGTAGTTGTAACTTCCGACCCTCACGTGGCGCGTGAAATCTTGAACTCGCCCCATTTCGCTGACCGTCCCGTTAAACAATCCGCTAAGAGCCTCATGTTCAACCGCGCCATTGGGTTTGCCCCAAACGGTGCGTATTGGCTCTTGCTGCGGAGGGTAGCCTCAACACACCTCTTCTCCCCGCGCCGCATTCTTGCCCACGAGCCAGGTCGCTTGCTAGACTGCGCTGCCATGTTACGGGCTATAGCTCAGGAGCAGTCCAAAAACGGGTTCGTGTGCCTAAGAAAACACCTCCAAGATGCAGCGCTGAATAACGTTATGGGAACTGTCTTTGGAAGAAGGTACCACGACCAAGATGAGTGTTATAATCGGCGTGAGATTGAAGAGGTGCGCGACATGGTGCGGGAAGGTTTTGAACTTTTGGGAGCTTTCAACTGGTCTGATTACGTTCCTTGGATCCGCTTCTTTTATGACCCTTTACGTGTTCGAGAACGGTGCTCCGTTCTTGCTCCGAGAGTGAAGAAATTTGTAAAGAGGATTCTGGAGGAGCACCGAATATTGGCTCCATTCAAGGAACTTTCTGATGACTCGGACTTCGTGGACGTGCTGCTCTCTCTAGAAGAAGATGACAAGCTCGAAGATGATGACATCATTGCTGTTTTATGGGAGATGATATTTCGTGGCACGGATACAACAGCACTTCTTACTGAGTGGGTCATGGCCGAGCTTATTTTGAATGAGCAAGTGCAAACTAGGCTTCGCAATGAACTCCGCAGGGTTGTGGGAAAGAAGATGGTAGTTACAGATGCTGATGTGATAAAATTGCCATACTTAGAAGCCATATTGAAAGAAACCCTGCGATTGCATCCAATTGGGCCTCTTCTTTCGTGGGCCCGATTGTCCACGTCAGATGTCCATCTGAGCAATGGAATGGTGCTGTCTTCCTCAAATGGGGCCACTACAAGTAATTAG 1314 0.5015 MGLPSSSLDTSWWVFTLPAIAGTQNLTHNPLLLIILTAILSIALLAWAFPRGGGGLAWRNGKNQMGRVPVPGPKGVPFFGLLFSLNHALPHRTLASIASALSATKLMAFSLGSSPVVVTSDPHVAREILNSPHFADRPVKQSAKSLMFNRAIGFAPNGAYWLLLRRVASTHLFSPRRILAHEPGRLLDCAAMLRAIAQEQSKNGFVCLRKHLQDAALNNVMGTVFGRRYHDQDECYNRREIEEVRDMVREGFELLGAFNWSDYVPWIRFFYDPLRVRERCSVLAPRVKKFVKRILEEHRILAPFKELSDDSDFVDVLLSLEEDDKLEDDDIIAVLWEMIFRGTDTTALLTEWVMAELILNEQVQTRLRNELRRVVGKKMVVTDADVIKLPYLEAILKETLRLHPIGPLLSWARLSTSDVHLSNGMVLSSSNGATTSN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00773 437 PANTHER CYTOCHROME P450 78A7-RELATED 10 426 - -
Vian3g00773 437 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 SUPERFAMILY Cytochrome P450 71 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 Pfam Cytochrome P450 71 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00773 437 Gene3D Cytochrome P450 58 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00773 Vian-Chr3 8106478 8109408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00773 6 433 Cytochrome P450 AT5G09970 61.860 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00773 K20619 - pop:7480731 536.954