Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00741 ATGGGCTGTGTTCAGGCCAAGCAATTGGATTCGGAAGGTCCAGACTACCGGGGCCTAGAGAGGTTGAAGTTGGATAATGGGTATGTCGCAAGCTCTGACTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGACCCCAATAAGGACCACCATCACAGGCTGCACCAGCATCAGAGAGAACAGCCCATAAAGAATAAAGTTGAGTCCGGTGTTGCCAAGGATGGTCCTGGGCATCATAAGGGCAAGGTGGTTGGAAGGGAGGGGAGGCGATTCACGCGTCTTGATGATAAAAAAGTGACAAACAAGTGTTGCTTTGAGGATGAGATGGTAGATGGGTGGCCAAGGTGGTTGGTTGATAATGTCCCTGCACAAGTGTTGGCTGGCTTGGTTCCCAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTTGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATAGAGACACAGGAGAAATTGTGGCCCTGAAGAAGGTTCGCTTCAATACATCAGAGCCCGAAAGCATAAAGTTTATGGCAAGAGAAATTACCATATTACAGAGACTGGATCATCCCAATGTAGTCAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGAGTTCATGCAAACAGATTTGGCACGAGTCATTGCTCGTCCTGAAGAGAAACTATCAGAACCACAGGTCAAGTGCTATATGCATCAATTACTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTCTTCACCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTCAGATTGCAGATTTTGGACTTGCCAATTTTTATGGTCCAGATTATCATCAGCCTCTCACTAGCCGGGTTGTGACACTATGGTACAGAGCTCCTGAATTGTTGTTAGGTGACACAAACTATGGAGTTGGTGTTGATCTGTGGAGTGCTGGATGTCTCCTGGCAGAAATGTTCAAAGGATTCCCAATCATGCCTGGCAGAAATGAGGTTGAGCAAATTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTACTACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTATAGAAACTTTCGGTGATCTCCCTCCTTCTTCTTTAGGTCTTTTATGCACCCTGCTTGCTCTGGATCCTGCATTCCGTGGAAGTGCATCCAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCGTGTGACCTCTCTGGTCTGCCTGTTCTCTTCAAAGAGGATGATGAGCATGTTCAAGCCAACGAACAGATCAAGTACATGAACTCTAAAATCAGACGTTCTCGTACATATCTGGAGCGTCGTAAGAATTCAGCATCTAAGAGGCCAACAGAGCATACTGTATCTTCTAAAGAGGAATTGATAAGGAATGCTAAACCTGAAACTTATGCTCCAACTGTAGACATGGGTAGCACAAGTAGTACCTCATCTAGTGTAAACCCAGGAGGGGCTAAGGACCAATCACCTTTTTTTCTATCTCCATTTGGGGAATTAGATCGAAAGCTATCTCCAAAAACCCACCACCACCATGTTAATGTTGGTGAAGAAAACATCAAAATTCTTCCTCCATTACCCAAGTCTAAACCAAATGCTACGAAGAAAGATGACAGTAGATACAGACCAGACCAGTTTTTCAGGTCAGCTTCCACCAGAGAATTTAGATACTTGAAAAGGGAAGAACGTTTACTATTGGATTTTGATCATTAG 1800 0.4322 MGCVQAKQLDSEGPDYRGLERLKLDNGYVASSDFVAHRRSTGQRHDPNKDHHHRLHQHQREQPIKNKVESGVAKDGPGHHKGKVVGREGRRFTRLDDKKVTNKCCFEDEMVDGWPRWLVDNVPAQVLAGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFEFMQTDLARVIARPEEKLSEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLQIADFGLANFYGPDYHQPLTSRVVTLWYRAPELLLGDTNYGVGVDLWSAGCLLAEMFKGFPIMPGRNEVEQIHKIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLIETFGDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPVLFKEDDEHVQANEQIKYMNSKIRRSRTYLERRKNSASKRPTEHTVSSKEELIRNAKPETYAPTVDMGSTSSTSSSVNPGGAKDQSPFFLSPFGELDRKLSPKTHHHHVNVGEENIKILPPLPKSKPNATKKDDSRYRPDQFFRSASTREFRYLKREERLLLDFDH 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00741 599 MobiDBLite consensus disorder prediction 463 489 - -
Vian3g00741 599 ProSiteProfiles Protein kinase domain profile. 138 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g00741 599 Gene3D Phosphorylase Kinase; domain 1 128 220 - -
Vian3g00741 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Vian3g00741 599 MobiDBLite consensus disorder prediction 463 519 - -
Vian3g00741 599 FunFam Putative serine/threonine-protein kinase 221 458 - -
Vian3g00741 599 SUPERFAMILY Protein kinase-like (PK-like) 133 424 IPR011009 -
Vian3g00741 599 MobiDBLite consensus disorder prediction 38 89 - -
Vian3g00741 599 MobiDBLite consensus disorder prediction 61 89 - -
Vian3g00741 599 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Vian3g00741 599 Gene3D Transferase(Phosphotransferase) domain 1 221 455 - -
Vian3g00741 599 MobiDBLite consensus disorder prediction 497 515 - -
Vian3g00741 599 PANTHER CELL DIVISION PROTEIN KINASE 136 425 - -
Vian3g00741 599 SMART serkin_6 138 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g00741 599 Pfam Protein kinase domain 138 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian3g00741 599 FunFam probable serine/threonine-protein kinase At1g54610 125 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00741 Vian-Chr3 7767468 7771596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00741 133 434 Core Cell Cycle Gene Families AT5G10270 46.562 4.97e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Vian3g00741 Pkinase 1.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00741 K08819 - gmx:100776854 1019.22