Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00710 ATGGAAGGGAATTTGCCCCAGGGAGGTATAATTCAAGGTGGGACGTCTTTCGGTGGCTTTGATTTGCCGGGATCAATTCGGGTTCAGCATCAAGCACAACATCCACATGCCATGCACCAACATCAAACTCATCCGCGTCAAGGATCTTCTGTACATTCCACAGTTCATGATGTTTTCCCTCTTACAATGGGAACCCTGCAGAACTGTGACCAAACTATTTCAATGACAGAGTTTAGTAAAGAAAACAGAAGTAAAAACTCAGCGAGTGAGGAAGACGAGCCGAGCTTTACCGAGGATGGTGTTGATTGTCACCATGAAGCTAGTAGAGGGAAGAAAGGATCACCTTGGCAGCGGGTTAAGTGGACTGATAAGATGGTAAGACTTCTGATAACAGCTGTTTCTTATATTGGCGAGGATGTGACTGTTGATGGCGGTGGCAGTGGAAGAAGGAAGTTTGCAGTATTACAGAAGAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAGAGGGGTTATCACGTTTCACCTCAGCAATGCGAGGATAAATTCAATGATCTCAATAAAAGATACAAAAAGCTTAACGATATGCTTGGGAGAGGCACTTCTTGTCAGGTTGTTGAAAATCCCGCTCTGTTGGATGTGATAGATTTTCTTTCTGATAAAGAAAAGGACGATGTTCGAAAAATATTAAGCTCAAAACACCTGTTCTATGAGGAGATGTGTTCTTACCATAATGGTAACAGGTTGCATTTACCCCATGATCCTGCATTGCAACGTTCACTCCAGTTAGCGCTGCGAAATAGGGATGATCATGACAACGATGATATGAGAAGGTCCCATCATGACGATCACGGCGAAGATGATCCAGATGTGGAAATTGATGATCATGATGATTTTGAAGAGAATTGTGCTTCTCATGGTGATAGTAGAGGAATATATGCACCATTAGGTGGAACTGTGAAGAAACTGAAACAAGGCCAAGGCCAAGAAGATGGTAATACTTTTGGCAATTCTCTAAATTGTCAGGACTACAACAGAAGTTCGTATCCCCATGGACAGATGGTCCAATCTGATGTGAATCAAGGTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCACTTCAGTTAGAGGAACAAAAGATACAAATTCAGGTTGAGATGCTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAGAAAAAGGATCGGGAGTTGGAGAAGCTAAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTTAAGCGAAAGGAAATGAGCACTGGCTTTAAATAG 1347 0.4224 MEGNLPQGGIIQGGTSFGGFDLPGSIRVQHQAQHPHAMHQHQTHPRQGSSVHSTVHDVFPLTMGTLQNCDQTISMTEFSKENRSKNSASEEDEPSFTEDGVDCHHEASRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDVTVDGGGSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDFLSDKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDMRRSHHDDHGEDDPDVEIDDHDDFEENCASHGDSRGIYAPLGGTVKKLKQGQGQEDGNTFGNSLNCQDYNRSSYPHGQMVQSDVNQGLPESMRAAWLQKQWVESRSLQLEEQKIQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMSTGFK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00710 448 MobiDBLite consensus disorder prediction 1 53 - -
Vian3g00710 448 MobiDBLite consensus disorder prediction 83 115 - -
Vian3g00710 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
Vian3g00710 448 Coils Coil 410 442 - -
Vian3g00710 448 Gene3D - 121 193 - -
Vian3g00710 448 MobiDBLite consensus disorder prediction 269 312 - -
Vian3g00710 448 MobiDBLite consensus disorder prediction 78 115 - -
Vian3g00710 448 MobiDBLite consensus disorder prediction 35 53 - -
Vian3g00710 448 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Vian3g00710 448 Coils Coil 382 402 - -
Vian3g00710 448 MobiDBLite consensus disorder prediction 269 288 - -
Vian3g00710 448 FunFam Sequence-specific DNA binding transcription factor 121 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00710 Vian-Chr3 7400898 7402244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vian3g00710 Myb_DNA-bind_4 6.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00710 - - gmx:100812134 793.882