Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00709 ATGGATCACAGTGCAGATGCTCAACGCACAGACTTGATGACCATAACCCGTTTCGTGCTCAACGAACAGTCGAAGCAACCTGAGGCTCGTGGCGATTTCACAATCTTGCTCAGTCACATTGTTCTTGGCTGCAAGTTCGTTTGTTCTGCTGTTAACAAGGCGGGTCTTGCTAAGCTTATTGGGCTTGCTGGAGAGACAAATGTCCAGGGTGAGGAGCAAAAGAAACTGGACGTCCTTTCCAATGATGTCTTTGTCAAGGCTCTGGTCAGCAGTGGACGAACATGCATCTTGGTGTCTGAAGAAGATGAGGAAGCAACATTTGTGGAGCCTTCTAAGCGTGGAAAGTACATAGTTGTTTTTGATCCGCTGGATGGTTCCTCTAACATCGATTGTGGTGTTTCTATTGGCACAATTTTTGGGATTTATTTGGTGAAAGAAAACCGTGAACCAACCATAGAAGATGTTTTGCAACCAGGGAAGAACATGTTGGCTGCTGGTTATTGTATGTATGGAAGCTCTTGCACGTTTGTGCTAAGCACCGGAAGTGGTGTGAATGGTTTCACCCTTGATCCATCTCTTGGAGAGTTCATTCTTACTCACCCTGACATCAAGGTCCCGAAGAAAGGAAAGATATATTCAGTGAATGAAGGAAATGCTAAAAATTGGGATGGTCCTACTACCAAGTATGTGGAAAACTGCAAGTTTCCAAAAGACGGTTCATCACCAAAGTCCTTAAGATATGTTGGAAGCATGGTAGCTGATGTTCACCGCACATTTCTTTATGGAGGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGTGTTCTCTACGAAGTCTTCCCAATGTCATTCTTGATGGAGCAGGCAGGAGGGCAGGCTTTCACTGGCAAGCAAAGGGCACTTGATTTGGTTCCAACAAAGTTGCACGAGAGATCTCCCATATTCCTTGGTAGCTATGAGGATGTAGAGGAAATCAAAGCCCTTTATGCTGCTGATCAAAAATTGGAATGA 1026 0.4454 MDHSADAQRTDLMTITRFVLNEQSKQPEARGDFTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFVKALVSSGRTCILVSEEDEEATFVEPSKRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYLVKENREPTIEDVLQPGKNMLAAGYCMYGSSCTFVLSTGSGVNGFTLDPSLGEFILTHPDIKVPKKGKIYSVNEGNAKNWDGPTTKYVENCKFPKDGSSPKSLRYVGSMVADVHRTFLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDLVPTKLHERSPIFLGSYEDVEEIKALYAADQKLE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00709 341 Gene3D - 204 341 - -
Vian3g00709 341 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Vian3g00709 341 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Vian3g00709 341 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Vian3g00709 341 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Vian3g00709 341 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 335 IPR000146 GO:0005975|GO:0016791
Vian3g00709 341 PIRSF FBPtase_SBPase 9 340 IPR000146 GO:0005975|GO:0016791
Vian3g00709 341 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vian3g00709 341 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Vian3g00709 341 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Vian3g00709 341 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Vian3g00709 341 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Vian3g00709 341 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Vian3g00709 341 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Vian3g00709 341 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Vian3g00709 341 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Vian3g00709 341 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Vian3g00709 341 FunFam Fructose-1,6-bisphosphatase class 1 204 338 - -
Vian3g00709 341 Gene3D - 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00709 Vian-Chr3 7391372 7394965 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vian3g00709 FBPase 3.7e-82 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00709 K03841 - gmx:100815943 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00893 8 21390355 21395786 Vian3g00709 3 7391372 7394965 PCT