Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00705 ATGGCATCTGATCACTCATCCCATAACCAGGCAAAATTCGTACTCGCAAACAATGACCTTGAGCAACAAGAAACTATGGAGGTTGAAACCAAGGACTTGGATTACTCAAAGCGATCTCAGTGGCTGCGTGCTGCTGTCCTAGGAGCCAATGACGGATTGGTCTCAACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAGGCAAGACATAAAAGTTATGATCCTAACAGGGTTTGCAGGGCTAGTGGCTGGTGCATGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCGCAGTTGGACATAGAAGTTGCTCAGATGAAAAGGGACAGTGAAAGGGAGAATGGCAGAGACAGAGATGAAGAGGAAGATGAGAAGGAGAAAGAGAGTTTACCAAACCCTATACATGCTGCAGCAGCCTCAGCTTTAGCATTTTCTGTTGGTGCAATTGTTCCTCTTCTTGCAGCCTCTTTCATAAGGGAGTATAAGGTGAGGATTGGTGTGGTTTTTGGAGCAGTGAGCTTTGCTCTTGTGGTGTTTGGTTGGCTTGGGGCAGTGTTGGGTAAGGCTCCAACGTTGAGGTCTTGTGTGAGAGTGTTGGTTGGGGGTTGGCTAGCCATGGCCATAACTTTTGGACTAACCAAGTTGATTGGGTCAAGTGGTCTTTAG 669 0.4768 MASDHSSHNQAKFVLANNDLEQQETMEVETKDLDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVRQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRDSERENGRDRDEEEDEKEKESLPNPIHAAAASALAFSVGAIVPLLAASFIREYKVRIGVVFGAVSFALVVFGWLGAVLGKAPTLRSCVRVLVGGWLAMAITFGLTKLIGSSGL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00705 222 Pfam VIT family 123 214 IPR008217 GO:0005384|GO:0030026
Vian3g00705 222 Pfam VIT family 42 122 IPR008217 GO:0005384|GO:0030026
Vian3g00705 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 217 IPR008217 GO:0005384|GO:0030026
Vian3g00705 222 MobiDBLite consensus disorder prediction 108 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00705 Vian-Chr3 7347476 7348144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00705 17 222 Nodulin-like Gene Family AT3G43660 70.388 5.99e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00705 K22736 - gmx:100814343 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g00913 8 22323948 22324625 Vian3g00705 3 7347476 7348144 PCT