Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00704 ATGGAAAACAACGATATCGGAGCTCCGTCAGATGCCTCGCTCTTTGACCAGATTGTGGCGACGGAGCAACCATACATCCCCATACACTCCGACCCCTCCTATCCTCTCCTCGACACCTTCGTCGACCTTCTCAACGTCGATACCAAACATTTTGATTTCGAAATGTTCAACTCTCCACTGCCTCCTCCTCCTCCGCCAACCGCTCCTCTAGTGTCCGTTCACTCCGAAACCTCGGAGAAACCCAACGAGCAGAGTTCGAAGCCTGCACCAGTAGGGTCCACAGACGGACTCGACAGTGGAAAGTCCGTGGTCTCGGATGATCTCTGCATGGCAGGCGGTGCTAAGAATTCCGGAGAGAACAAGCAGAAGCCGCGTCGGCAGAACGTTCCCCTGGACGCGTCACTGACAGCTTTGATGCAGGCCGGGCCAGCGATTTCATTGGCGAGGAGGCCCATGGGGCCGGAGGAACTTGCTGAACTTGCTATGGTTGATCCTAAGAAGGCTAAGAGGATTCTTGCTAATAGGGAATCTGCTGCTAAATCAAAGGAAAGGAAAAAGCGTTATTTGATAGAGTTGCAAAAGAATGTGGAATTGCTTGAAATTCAAATAACTAACCTGTTTAATAATATTTGCTTGCTTCAGATGGGGAATAGAGGAAGGGCTCTTCATGTAAAGGAGGTCAGAGTAAAATTAGACATCATGCGAGAAGAAGACCGAATTAAAGATGCTCTGAGTGTTGTGTTGAATGGAGAAATTCAGGGCCTGAAGGATGAAAATAGAAATCTAGATGTTTTATTGAGTTGTCGTTTTCAAGGGAACATTTTCTCTCCATTCTCTTCCAAGTTACCTCTGCAACAGTTTCATAACCCTCCATCTCAGCAGCATCTGAACCCTCAGCAACCACAACTCTCCAGGGGGCATTATGGCCCTAATATATAA 939 0.4782 MENNDIGAPSDASLFDQIVATEQPYIPIHSDPSYPLLDTFVDLLNVDTKHFDFEMFNSPLPPPPPPTAPLVSVHSETSEKPNEQSSKPAPVGSTDGLDSGKSVVSDDLCMAGGAKNSGENKQKPRRQNVPLDASLTALMQAGPAISLARRPMGPEELAELAMVDPKKAKRILANRESAAKSKERKKRYLIELQKNVELLEIQITNLFNNICLLQMGNRGRALHVKEVRVKLDIMREEDRIKDALSVVLNGEIQGLKDENRNLDVLLSCRFQGNIFSPFSSKLPLQQFHNPPSQQHLNPQQPQLSRGHYGPNI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00704 312 MobiDBLite consensus disorder prediction 71 92 - -
Vian3g00704 312 CDD bZIP_plant_RF2 167 218 IPR044759 GO:0003700|GO:0006355
Vian3g00704 312 MobiDBLite consensus disorder prediction 286 312 - -
Vian3g00704 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 214 IPR004827 GO:0003700|GO:0006355
Vian3g00704 312 Coils Coil 182 209 - -
Vian3g00704 312 Pfam Basic region leucine zipper 164 213 IPR004827 GO:0003700|GO:0006355
Vian3g00704 312 Gene3D - 165 215 - -
Vian3g00704 312 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Vian3g00704 312 MobiDBLite consensus disorder prediction 57 127 - -
Vian3g00704 312 SUPERFAMILY Leucine zipper domain 166 214 IPR046347 GO:0003700|GO:0006355
Vian3g00704 312 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 57 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00704 Vian-Chr3 7328788 7333767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00704 148 256 bZIP Transcription Factor Family AT2G40620 43.119 1.46e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian3g00704 bZIP_2 2.5e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00704 K20557 - gmx:102664725 187.578