Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00702 ATGACTCTCATTCCAGAACTTCAGGCCACAGAGCTGTTGCCAAGAGTTGTGAGCACTGGCAAGTCCTCCGCAAAAAGACAGAAGCTTCAAACAGATATTGAGGAGAAGCTTGCCATCACTGAATGCAGTGGCGACTCACAACCCAATTTGACTTCCATTATTTCCCACTACCTCCAGAGTCTAAAACACTACAGCTTACGCAACTTGGGCTATCCTACCAATCAAGATTTCAACTATGACCCATTACACCCGTTACTCGATTTTCACCTTAACAATGCTGGTGATCCATTCCTGGGAAGCAGTTTCTCCCTAAATTCAACAAGTTTTGAAGTTTCAGTGCTTAATTGGTTTGCAAGTATCTGGGAGATAGAGACGAGTGAGTACTGGGGATATGTGACAAGTGGAGGAACAGAAGGAAATCTTCACGGGATTTTAGTAGGGAGAGAACAACTTCCTGATGGGATATTATACACCTCAGAAGATTCACACTATTCAATCTTCAAAATAGCAAAAATGTATCGAATGAAGTGTGTGAAGGTTAGAACATTAATCTCTGGTGAGATTGATTGTGCTGATCTGAAGGTTCAAGCTCTTGCACACAAGGACAAGCCAGCCATCATCAACTTAAACATAGGAACGACAATGAAAGGAGGTATTGATGACCTTGATCTTGTAATACAAACTCTGGAGGACTGTGGCTTCACTCCTGATCGCTACTATATTCACTGTGATGGAGCTCTATTTGGAATGATGTTTCCTTTTCTCAAACAAGCATCAAGGATTAGCTTCAAGAAACCTATTGGAAGTGTGACTATTTCAGGTCACAAGTTTTTGGGATGTCCAATTCCTTGTGGTATAGTATTAACTCGTTTAGAATACATCAACGGATTATCCAAAGATGTTGAAGTTATTGCTTCAAGGGATGCCACCATCACAGGTAGCCGTAGCGGCCATGCTCCAATTTTTCTTTGGTACGCTTTAAAAACAAGAGGTTTAGTAGGACTCCAAAATGAAGTGCAAAAGTGCATAATGAATGCACAATACTTAAAAAATCGATTACTTGATGCTGGAATCGGTGCAATGTTGAACAAATTTAGCAATATCGTTGTCTTTGAGAGACCTTTGGATTATAAGTTTTCCCGTAGGTGGAATTTGGCGTGCAATGGTAATATTGCACATGTGGTGGTGATGCAACACATCACCGTTCAAATGTTAGACTCTTTTGTTGATGAATTTCTTCAACAGCGATCCATTTCGTTTGAAGAAGGACGATTTCAACCTATCTGCGTTGCAAATGATATTGGTGCTGCAAATTGTGCTTGTACATTACACCATTCAATATCATAA 1347 0.4031 MTLIPELQATELLPRVVSTGKSSAKRQKLQTDIEEKLAITECSGDSQPNLTSIISHYLQSLKHYSLRNLGYPTNQDFNYDPLHPLLDFHLNNAGDPFLGSSFSLNSTSFEVSVLNWFASIWEIETSEYWGYVTSGGTEGNLHGILVGREQLPDGILYTSEDSHYSIFKIAKMYRMKCVKVRTLISGEIDCADLKVQALAHKDKPAIINLNIGTTMKGGIDDLDLVIQTLEDCGFTPDRYYIHCDGALFGMMFPFLKQASRISFKKPIGSVTISGHKFLGCPIPCGIVLTRLEYINGLSKDVEVIASRDATITGSRSGHAPIFLWYALKTRGLVGLQNEVQKCIMNAQYLKNRLLDAGIGAMLNKFSNIVVFERPLDYKFSRRWNLACNGNIAHVVVMQHITVQMLDSFVDEFLQQRSISFEEGRFQPICVANDIGAANCACTLHHSIS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00702 448 PANTHER - 23 445 - -
Vian3g00702 448 Gene3D - 86 326 IPR015421 GO:0003824
Vian3g00702 448 Gene3D Aspartate Aminotransferase, domain 1 327 416 IPR015422 GO:0003824
Vian3g00702 448 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 269 290 IPR021115 GO:0016831
Vian3g00702 448 Pfam Pyridoxal-dependent decarboxylase conserved domain 107 355 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vian3g00702 448 SUPERFAMILY PLP-dependent transferases 67 413 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00702 Vian-Chr3 7321005 7322776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00702 211 350 Calmodulin-binding Proteins AT1G65960 28.387 8.90e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00702 K25193 - gmx:100781665 703.745