Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00700 ATGGAGATGGAGAGGTACACCGGTCAGCGGTGGCGACCTACCGACGATCAGGTCAAGATGATGACCAGAATCTACAACTTTGGGGTCACACACCCAAGCAGAGCGCAAGTTGTCGAGATCGCGTCTCGACTAAGGACCCTCGCAGATGCCAGCGAATACAACGTGCACTGCTGGTTCAACAATCACGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCCACTGGCACTCAGTTTTCACAACTGCCGCTATATATGTATGAATACGACTGGGTGATCATGAGGGCGCCGAGGCTGCTGAACTTGTTCCCCGTTCCGATCATCATTGACGACGACAGGGACGGACGACAAATCGCTCCACCCATGCATCTCACATTCCGGACCAGAACTCCCTCGACGGAGCTCTCCCTCAGACCACCGCAACCAGCTCGGGAATTTTTTCGCTGA 450 0.5533 MEMERYTGQRWRPTDDQVKMMTRIYNFGVTHPSRAQVVEIASRLRTLADASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYDWVIMRAPRLLNLFPVPIIIDDDRDGRQIAPPMHLTFRTRTPSTELSLRPPQPAREFFR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00700 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian3g00700 149 PANTHER WUSCHEL-RELATED HOMEOBOX 13 9 72 IPR044559 GO:0003700
Vian3g00700 149 Pfam Homeodomain 9 68 IPR001356 GO:0003677
Vian3g00700 149 Gene3D - 8 73 - -
Vian3g00700 149 ProSiteProfiles 'Homeobox' domain profile. 4 69 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00700 Vian-Chr3 7284078 7284629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00700 1 72 Wox Gene Family AT5G59340 36.842 9.03e-10 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian3g00700 Homeodomain 2.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00700 - K03992 vum:124821070 273.478