Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00697 ATGAGTCCTACAAAAATTGAACCCGAAGAGGTTGAAGGAGAAATAATCGGTAGCACAGATTACTTCTTCGTGAAAGTCGGTGAGGCTGTTCCGTTGAAAAGCTCCGACTTCAATTTTGAAGTTGAAACCCTTCCCTCGCAGGCTATTGCCATCTCTGAGCGCTTTCGTCTCACTTTTGTGGCTCATTCTTGCGGTTTTTTCGTTGTGAGGACAAAGGACCTTATTGATTCTGCAAACGAGTTTAAGGAGAAGAGAAATGGCTCTCCCGTGCAGCAACTGAGTCTTGTGGATGTTTCTATTGGGAGGATACGATCATTGACTCTTTCCACAGATAATTTGACACTGGCTGCTGTGACTTCTTTGTCCGGAGATATTCGGTTTTACTCTGTTGAAAGCTTTCTGAACAAGGAAGTTAAGCAATCCTTTTCCTGTTCACTCGACGATTCAGCCTTGGTCAAGGACATGCGTTGGATAACAACACAAAAAAATTCTTACATTGTTCTTTCAAATACTGGGAAACTATATCACGGAGAGATTGGTTTTCCACTTAAACAAGTGATGGACAACGTTGATGCTGTTGATTGGGGTATGAAAGGTTCATTTGTTGCTGTTGCAAGTAAGAGTGTTCTAAGCATTTTATCAGTTGAGTTTGAAGAAAGAGTTTCAATTTCACTCTCCTTTGGATCATGGATTGGTGATTCTGCAGCAAATAATAGTATAAAAGTTGATTATGTAAAGTGCATTCGACCTGATTCTATTGTAATTGGATGCGTTCAAGTTACTGAAGATGGCAAGGAGGAAAATTATCTTGTCCAAGTTATTAGAAGCCGACATGGTGAAATTAATGATAAATGTTCTGAATTAGTTGTTCAATCCTTCTATGATATATACCAAGGGTTAATTGATGATATTGTACCAGTGGGAAGTGGGCCTTACCTTTTATCGGTGTACATAAACCAATGCCAACTTGCAATCAATGCCAACTTGAAGAATACAGATCAGCACATTATATTACTTGGTTGGTCAGCAGATGATGACAAGAGTGAAGCTGCAATTGTTGATATTGAACGAGATAAATGGGTTCCAAGAATTGAACTTCAAGGTGTATGGCCAAAGAGTTCTTCATTGAATATTGCTTTGAGTTCTGATGCAACAATTAGAATTTCGGGGAAGGGAATAACGGTGAATAAGTACTTGGGGGATGTGGCGTTCAACAACATCACGAGGTTGACATTTGGGAAAAGATTTGTACCCAGAAGGTGTGCTGCACGAGCAAGGTGGAATTCAACAACACACATCTCTTGGCTCCACAGGATGTTCCCTCTAGAAGTAGGGGCTTTTGCCAACCATCGACCTAGGCCTGATAGTTTCACCAGATTGTACCAACTCTCTCTCTTGCCCATGGTTTTAGGAAATAAAGATTCACCGGAGATTGTTTCTGTTCTGCACAATTATGAAAATACTTCTCTAGAAAGCCATCCAGGAGATAAAGGTTGCACTTTTTCTGAGGGATTGCAGAAGCAGGAAGATAAGACTTTTGAGGTTAATGGGAATCTGATGGCCAAGCCCTCTGGCAGTCTTCAACAAATAACATGTTCTGATACTAAGGACTCAGAAGTGAAATTAGTGGCAAATTCACAGAGTCTATCGTCTAATGAACAACAAGTTGTTTCTGTTGTAGATGCGAATCAAGATACTGGTAATCAAAATCCATTTGGTTCAGGTGAACCACAAAAGATCTTAGGTCAAAAGACTGCAGCCCTTGGAACTAACATTGGTTCTTTAACAGTGAACAATCATTCTGCTTCTTCTGGTTTACCAGAAACTACTGAGAAGACCAGGGAGCTGTGGACAGGAAATAGCTCACGGGACTCGCAGAGAGCTTTTAATCTATTTCCTGGTGAAAAATTTTCATTCCCAAAAGAGTCACATGTGTCTTCAGTTTCAGCTTCTAGCTACGCTGATGGTGTGGGTTTTCAAGATAGAAAGTATACCATGGGTGCCACAAATGTTTCTGGGATTATAGGTGGAAAACCCTTTGTTGTACAGGATATGAATAAATCTCCAGCCATCAACTCCACCAGTAAGCTAGCTCAGAATAGGGGACAACTATCTCCTTTAGTAGCTGGAAATATGCTACCAGCGTTGAATAGCAGTTCACATTTGTCATCTGACAGTAATACTGCAGCTATGAAGTCTTCTGCTACGAAATTCCTTCCTTCAAATGAGCAGCATGGAACTTCAACTAAGCTTGGGATATCCAGTTCTGATTTATCCAAACAGTTTGGCAATATTAATGAGATGACTAAAGAATTGGATCTACTTTTGAGATCAATAGAAGTGGCTGGTGGGTTCAAAGATGCTTGCACAAGGTCACTACAAAGTTCAATTGAAGAAGTGGAGCTAGGCATGGATGCTTTCTGTGATTCCCAAGTGGATGAACATCACGAGGAAGTTCATTATCTTCTTAACAAGACAATACGAGTTATGGCAAGAAAAATATATTTGGAGGGCGTATATAAGCAAGCTTCTGATAGCCGATATTGGGATCTATGGAATAGGCAAAAGTTGAATTCAGAACTTGAGCTAAAACGACAGCATATATTGAGTCTGAATCAGGATTTGACCAATCAATTAATTGAATTGGAGAGGCATTTCAATGCCCTTGAACTGAATAAATTCAGTCAAAATGGTGGCCGGGGCATGGGTCATGGACCTTCCCAAAATAGATATGGACCTTCGAGATTTGCATTTAGCTTCTCTGGGAATTTTACATATGGCTTGTCTAGAAGTCTTCTTTTTGTGGATTTGGAGAGATTGAAGGCTTTGCATTGCATTAATACTGCAGAAAATCTCTCTGATTGCCTTTCAAAACAAATGTCAGCGTTGAGTTTAAGGTCTCAAACTGAGGAAAGAAAGAATTTGAAGGAGCTACTTGAAACAATAGGAATTCCATACGAGGAAGCTTTTGGCTCACCAGACACGAAATGTTTTATGAAGACTCCACCTAGTAAGAAGATTCTGTTTTCTGATTTGACAGTTAATAAAGATCAATCTAGGAGATATCAAACCAGTGCAGTGAAGAGTTGTGAACCGGAAACGGCCAGGAGGAGAAGAGACTCACTTGACCGGAGTTGGACCTGTTTTGAACCTCCTAAGACCACCGTCAAGAGGATGCTACTGCAAGAACTTCAGAAACTTAATAAAAAAGAATCATTATATTCAATGAATAAAGAAAAAAAAGCTACCACGTTAGAGGGATCTGCTCCTCGTCAGACAGATGCTAGAATTCCTTCAGTTGTATTCCCTTCTAAAACGAAAGCAAACATTCTAAATTCTCATCTTCAACTTGAAGAGGTGTCGGAAAAATCAAAGGCATTTATACCTGCTGACAGCCTCCGAGCACCCACTCAATTTTCAGAGTGTACATCTAGTGTTTTGCCAAAAGGTAATGCTTTATTCATACCCCCACAGTCTGCATTCCATTTGTCACCAACAATGGTGCATGGTTATTCCACAGAGACTAAAGATTTGGCTACTGAAAAATCAACTGTTCAAAAGTTTGATTTTGCTTCAAATAATGAAAACAAGCCTACCCTGCATTGGAAAATCGCTCAAAAATCATCAATACCTACCTATTCAACCACAGAAACACCTTCAATGCAGACTATATCCAGTGAAATGCCCATTACAAAGAGTAAAATGACTATTGCTACGAGTTCCACAACCGTAGACAAACCTTCTAGTGCGTTTACTCCCGAGACTTTGAGAAAAGTCTTCCCGTCATCTGAGACACAGTCATCTACTACTTCTACATCGTCACACTTCCTGGGAAAAGTTACTGAATTCCACGTTGATAAAAGCCTGCCCAAGGAAAATGTTCCTGCAGTCCCCACATTTGATGGTTCATTTAACTTTGTGCCATCTTCGACTGCTAAGACATCATCCTCCCCACCATCATCATCTGTCCCATCTGCAGCAGTGCCAGTAGCAGCGTCAGTGACATCAAATAGCTTGACTAGTTTGAAAACCACTACGGATTCAAATCTTGCCATGTCATCATCTTCATCACCTTTTCTTCACTTTTCTAATCAGAAACCTAAAGACACAGTGACATCGCTACCTAACCCACCTGGCTTTAAGTCTTCCATAGGGCCACTTAAGTCAGAGACTCAACCAGCTTCCGTATCTAAATCAGATATTCAACCGGCTTCTCTACTGAAAGCAGATATTCAACCAGCTGCTGTGTCTAATTCAAAGACTGATCCAGACGCTGCTGCAGAAGTAGTCACTAGACCGAATGAACCCGTAAATAATGCATCTGAATTGAAGCTTGAACCTACAAGGAAATTCAGTCCTACTATCGATCAATCTTCCTCCAACAATATAACAAGTTTTGATCTCAATGCAATCCCAGTTTCTCAAGCTGCACGACCTTCTGATACTCCCTTGCAGTTTTCAACTTCTTTCCTTTCTTCTGCTAGTGCTTCAAGTGGGAAAAATGAGGGTTTGGAAGTTGGAATTTCACATGAGGATGAGATGGAGGAAGAAGCTCCTGAGACAAGTAACAACACGGCTGAACTTAGTTTGGGAAGTTTTGGCGGGTTTGGGATTAGCTCAAGCCCTAACCCATCAATGCCTAAGTCAAATCCTTTTGGGGGTTCATTTAATAATGTAGCGACTAGTTTATCAAGCTCTACAGTTTCATTCTCTGTTCGTAATGGAGCGATGTTTAAACCAGCATCTTTTACTTTCTCAAACCCTCAGTCATCTGCGCAAACTCAGACAACAAATCCTGGTGCATTCTCTGGTGGCTTCAATACTGGCGCAGCTGTTCCTGATCAAGCTCCTCCTAGTGGGTTTGGGAAGCCAGCTCAAATTGGATCAGGGCAACAGGTTCTTGGATCAGTACTCGGTGGTTTTGGACAATCAAGACAGCTTGGTAGTGGTTTACCTGGAAGTGGTTTTTCCCCTCCCAGTGGTTTTGGTCGTGGATTTGCTGGAAGTAGTTCTACTAACACTGCCATTGGTGGAGGGTTTGCTGGCATAGCATCAACAGGCAGAGGCTTTGCTGGTGTTGCATCCCCTGCTAGTGGATTTTCTGGTGGTGGATTTGCCGGTGCTGCTCCTCCTGGTGTTGGAGGATTTGCTGGAGCTGGTTCAGGTGGTGGTTTTGGAGCATTTAGCAGCCAAGGGAATAGTGGATTTGGTGCAGCTGGCGGCAGTAAGCCACCTGAGCTATTCACACAGATGAGAAGGTAG 5262 0.4152 MSPTKIEPEEVEGEIIGSTDYFFVKVGEAVPLKSSDFNFEVETLPSQAIAISERFRLTFVAHSCGFFVVRTKDLIDSANEFKEKRNGSPVQQLSLVDVSIGRIRSLTLSTDNLTLAAVTSLSGDIRFYSVESFLNKEVKQSFSCSLDDSALVKDMRWITTQKNSYIVLSNTGKLYHGEIGFPLKQVMDNVDAVDWGMKGSFVAVASKSVLSILSVEFEERVSISLSFGSWIGDSAANNSIKVDYVKCIRPDSIVIGCVQVTEDGKEENYLVQVIRSRHGEINDKCSELVVQSFYDIYQGLIDDIVPVGSGPYLLSVYINQCQLAINANLKNTDQHIILLGWSADDDKSEAAIVDIERDKWVPRIELQGVWPKSSSLNIALSSDATIRISGKGITVNKYLGDVAFNNITRLTFGKRFVPRRCAARARWNSTTHISWLHRMFPLEVGAFANHRPRPDSFTRLYQLSLLPMVLGNKDSPEIVSVLHNYENTSLESHPGDKGCTFSEGLQKQEDKTFEVNGNLMAKPSGSLQQITCSDTKDSEVKLVANSQSLSSNEQQVVSVVDANQDTGNQNPFGSGEPQKILGQKTAALGTNIGSLTVNNHSASSGLPETTEKTRELWTGNSSRDSQRAFNLFPGEKFSFPKESHVSSVSASSYADGVGFQDRKYTMGATNVSGIIGGKPFVVQDMNKSPAINSTSKLAQNRGQLSPLVAGNMLPALNSSSHLSSDSNTAAMKSSATKFLPSNEQHGTSTKLGISSSDLSKQFGNINEMTKELDLLLRSIEVAGGFKDACTRSLQSSIEEVELGMDAFCDSQVDEHHEEVHYLLNKTIRVMARKIYLEGVYKQASDSRYWDLWNRQKLNSELELKRQHILSLNQDLTNQLIELERHFNALELNKFSQNGGRGMGHGPSQNRYGPSRFAFSFSGNFTYGLSRSLLFVDLERLKALHCINTAENLSDCLSKQMSALSLRSQTEERKNLKELLETIGIPYEEAFGSPDTKCFMKTPPSKKILFSDLTVNKDQSRRYQTSAVKSCEPETARRRRDSLDRSWTCFEPPKTTVKRMLLQELQKLNKKESLYSMNKEKKATTLEGSAPRQTDARIPSVVFPSKTKANILNSHLQLEEVSEKSKAFIPADSLRAPTQFSECTSSVLPKGNALFIPPQSAFHLSPTMVHGYSTETKDLATEKSTVQKFDFASNNENKPTLHWKIAQKSSIPTYSTTETPSMQTISSEMPITKSKMTIATSSTTVDKPSSAFTPETLRKVFPSSETQSSTTSTSSHFLGKVTEFHVDKSLPKENVPAVPTFDGSFNFVPSSTAKTSSSPPSSSVPSAAVPVAASVTSNSLTSLKTTTDSNLAMSSSSSPFLHFSNQKPKDTVTSLPNPPGFKSSIGPLKSETQPASVSKSDIQPASLLKADIQPAAVSNSKTDPDAAAEVVTRPNEPVNNASELKLEPTRKFSPTIDQSSSNNITSFDLNAIPVSQAARPSDTPLQFSTSFLSSASASSGKNEGLEVGISHEDEMEEEAPETSNNTAELSLGSFGGFGISSSPNPSMPKSNPFGGSFNNVATSLSSSTVSFSVRNGAMFKPASFTFSNPQSSAQTQTTNPGAFSGGFNTGAAVPDQAPPSGFGKPAQIGSGQQVLGSVLGGFGQSRQLGSGLPGSGFSPPSGFGRGFAGSSSTNTAIGGGFAGIASTGRGFAGVASPASGFSGGGFAGAAPPGVGGFAGAGSGGGFGAFSSQGNSGFGAAGGSKPPELFTQMRR 1753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00697 1753 Coils Coil 854 892 - -
Vian3g00697 1753 MobiDBLite consensus disorder prediction 1512 1550 - -
Vian3g00697 1753 MobiDBLite consensus disorder prediction 1734 1753 - -
Vian3g00697 1753 MobiDBLite consensus disorder prediction 1521 1550 - -
Vian3g00697 1753 SUPERFAMILY Nucleoporin domain 12 231 - -
Vian3g00697 1753 MobiDBLite consensus disorder prediction 1360 1393 - -
Vian3g00697 1753 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP214 ISOFORM X1 515 1753 IPR044694 GO:0006405|GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00697 Vian-Chr3 7189518 7207566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00697 390 459 Monolignol Biosynthesis Gene Families AT2G40890 42.529 1.86e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00697 K14317 - gmx:100806517 1545.02