Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00691 ATGTTACAGAACAAGGAGAGTGAGGTTTTGAGCAGCAATTTGAAGGCAAATAAAATGGAGAAGTTTTTCAGTATGTTTTGTGGGGAAGCTGGTTGTTCAGTGCCAGGAGGGCATCCTTGCATTTATGATTTTGAGTTTCTGAAAGATCCATCCTCGTGTATCAACCATTTGCTATTCATTTGCATTGATGTGTTGCTGCTGATCATGATTTCATTTGCAATCCTCAAGAAGTCATCAGAGAAACCATCTCAGGGTGTAATCAGAGTGCAAAATTATTCCAAATTGCAGCTAGTGTCTGCCATAGCCAATGGCTCTCTGGGGCTGATACAGTTGTGCTCAGGCATTTGGCTTTTAGAGGAGAATCTGAGGAAAGCACAAACTGTTTTTCCTCTTGATTGGTGGATGCTAGAATTCATTCAGGGATTCACTTGGTTGCTGCTGGGTTTTGCAATAAGTCTTCAGCTGAAAAAACTTCCAAGAACATGGTTATTTATGTTTTCTATTGTAATCTTCTTGTTTTCTGGTATTCTCTGTGTTTTATCCTTGATTTATTCAATTGATTACAGAAAACTATCCCTGAAAATAGTTCTAGATGTTTTATCTTTTCCAGGGATAATTCTGTTGCTATTATGCGTTTACAAGGAATCTAAGTACAGAGACACTGAGAGAGAAAATAATGGAAGTCTGTATACCCCTTTAAAAGAAGAGACCAATAAAGTTGACTCTGATAGTTATGTCACACTATTTTCAAAAGCTGGATTCTTCAGCAGGATGTCATTTTGGTGGATGAATCCATTGATGAAAAGGGGTAAGAAGAATACACTTAAGGAAGAGGATATTCCAAAGTTGAGCGAAGCAGATCAAGCAGGAAGTTGTTATTTTCTGTTTCTAGACCAATTGAACAGACAGAAACAGAAAGAACCGTCATCGCTGCCATCAGTTTTGTCGACAATATTTATGTGCTACTGGAAGGAGATTTTGATATCAGGATTATTTGCTATGTTAAAGGTAATCACTCTCTCTTCTGGCCCTTTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTCATGGGAGTTTCAAATATGAAGGCTATGTATTGGCCATAGCACTGGTCTTCACAAAGATCATAGAATCCTTATCACAAAGGCAGTGGTACTTCCGCACCAGACTCATTGGTGTTAAAGTTAGATCATTGCTCATTGCAGCAATTTATAAAAAGCAACTAAGGTTGTCTAATGCTGCAAGATTGACGCACTCTGGTGGTGAGATAATGAACTATGTCAATGTGGATGCCAATAGAATTGGAGAGTTTCCCTATTGGTTTCACCAGACGTGGACAACAAGCGTTCAGCTATGTATTGCATTGGTGGTGCTTTTCCGTGCTGTTGGACTGGCAACATTTGCCTCATTGGCGGTGATAGTTCTAACTGTGCTCTGCAATACTCCACTTGCTAAGTTGCAGCATAAGTTTCAGAGAAAACTTATGGTGGCACAAGATGAGAGATTGAAGGCCACTTCCGAGGCTCTTGTGAGCATGAAGGTGTTGAAGCTATATGCGTGGGAAACCAATTTCAGAAATGCAATTGAAAAGTTGAGGGATGTGGAACTAGAAAGGTTGTCTGTGGTGCAATTGAGAAGGTCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTCTCTGCTGCTTCCTTTGGGGCATGTTACTTGCTTAATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTAGCAACTTTACGCCTTGTTCAAGATCCTATTAGAACAATTCCTGATGTCATTGGAGTGGTCATTCAAGCAAAAGTTGCATTTGCAAGGATTGTAAAATTTCTTGAGGCGCCTGAACTGCAAAGTGAAAATTCTAGGAGAGGTTTTAGTGACAATAAGAGGGGCTCAATTTTGATCAATTCGGCTAACTTTTCATGGGAAGATAACTTGTCAAAACCAACACTGAGAAACATAAACTTGGAGGTTAGACCAGGGAAAAAAGTAGCAATCTGTGGAGAAGTTGGCTCAGGAAAATCAACCCTTTTAGCAGCAATTCTCAGAGAAGTTCCTATTACTCGTGGAACTATTGAAGTTCATGGAAAATTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTACAATACGTGAGAATATATTGTTTGGAGCAGCCATGGATGCTGAAAAATATCAAGAAACACTTCATAGGTCTTCACTGATGAAGGACATTGAGTTGTTTCCACACGGTGATCTCACTGAAATAGGGGAGAGAGGGGTCAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGCGCTCTTTATCAGAATGCTGATATTTATCTCTTGGATGATCCATGCAGTGCTGTTGATGCACACACTGCTACAAACTTGTTCAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTGACTCATCAAGTTGATTTTCTTCCAGCCTTTGATTCTGTTTTGTTGATGTCCAATGGGGAAATCATAGAAGCTGCTCCTTATCATGATCTGTTGAGTTCAAGCCAAGAATTTCAAGACCTTGTTAATGCTCACAAGGAGACCGCTGGTTCTGAGAAACTAGTGGATGTCACTTCTTCTAGTAGAAATTCGAATACTGTTACAGAGATTAGTAAAATACAAATGGAGAAGCAGTGCGAAACATCACAAGGAAGTCAATTAATAAAGAAAGAGGAGAGGGAGAAAGGAAACAGAGGGTTCAAACCTCACTTGCAGTATCTAACTCAGAACAAAGGATATATATACTTTTCTGTGGCTTCTATTTCTCACCTTATTTTCACAATTGGCCAGATATTTCAGAACATATGGATGGCTTCCAGTGTTGACAACCCTTATGTCAGCACATTGAAATTGATTGCAGTGTACTTGTTGATTGGCTTTATTTCTGCATGTTTCTTGTTCATCAGAAGTCTTGTTGTGGTTGCTATGAGTATTCGAACATCAAAATCTTTACTTTTACAGCTACTGGACTCCCTTTTTCGTGCACCTATGTCATTTTATGACTCCACACCTTTGGGAAGGATTCTTAGTAGGGTCTCCTCGGATCTAAGCACTGTGGATCTCGATGTCCCATTTGGCCTTATTTTTGCTGTGGGAGCTACTGCAACTTGTTATTCAAATCTTGCAGTTATAGCAGCCATTACTTGGCAAGTCCTGTTTATCTCTGTACCAATGCTTTACATAGCATTTCGCTTGCAGAGATATTACTATGCCACTGCAAAAGAATTGATGAGGATGAATGGCACGACAAGATCTTATGTGGCTAATCATCTTGCCGAATCTATTGCTGGAGTTGTGACAATAAGGGCTTTTGAAGAGGAGGATCGTTTTTTTGCTAAGAATCTTGATCTGATTGATGTCAATGCCAGTCCTTACTTTCATACCTATGCAGCAAATGAATGGTTGATGCTAAGGTTAGAAACAATAAGTGCAGTGGTTTTTGCATCTGCTGCACTCTGCATGGTGGTACTTCCACCTGGGACTTTCAACTCTGGGTTTATTGGCATGGCTCTCTCATACGGCCTTTCATTAAACTCTTCCCTAGTGTTTTCAATTCAAAACCAATGCACTCTAGCAAATCAAATCATATCAGTAGAGAGGCTAAATCAATACATGCATATACCAAGTGAGGCCCCAGAAGTGATAGAAGGAAATCGTCCACCTACTAATTGGCCAGCTGAGGGAAAAGTAGAAATTCATGATTTGAAGATAAGGTACCAGCCTGATTCACCACTAGTACTGCGTGGGATCACATGCACGTTTGAAGGAGGGCACAAGATTGGTGTTGTTGGCAGAACAGGAAGTGGAAAGTCCACTCTTATAGGGGCCCTATTCCGTCTGGTAGAACCTGCTGGTGGGAAAATAGTAGTTGATGGCATAGACATTTGTTCTATTGGACTTCATGATTTGAGGTCACGCTTTGGTATTATACCTCAGGATCCTACTCTTTTCAATGGAACAGTCAGATACAATTTGGACCCCTTATCTCACCACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAATGTCAGCTGAGAGAAGTTGTTGAAGAGAAAGAAGAGGGGTTGGATTCTTCAGTTGTTGAGGCAGGGGCAAATTGGAGCATGGGGCAACGACAGTTATTCTGCTTGGGGCGTGCCCTTTTGAGGAGAAGTCGGATACTAGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTACAGAAAACAATCAAGGGAGAGTTTGCAGATTGTACTGTAATCACTGTAGCCCACAGGATACCAACTGTGATGGACTGCACTAAGGTTGTGGCCATCCATGAAGGAGAATTGGTGGAATATGACGACCCAATGAAGTTGATGAAGAGAGAAGAATCACTGTTTGGACAGCTTGTGAAGGAATACTGGTCTCATTTGCAGGCTGCAGAATCACACTAA 4491 0.4077 MLQNKESEVLSSNLKANKMEKFFSMFCGEAGCSVPGGHPCIYDFEFLKDPSSCINHLLFICIDVLLLIMISFAILKKSSEKPSQGVIRVQNYSKLQLVSAIANGSLGLIQLCSGIWLLEENLRKAQTVFPLDWWMLEFIQGFTWLLLGFAISLQLKKLPRTWLFMFSIVIFLFSGILCVLSLIYSIDYRKLSLKIVLDVLSFPGIILLLLCVYKESKYRDTERENNGSLYTPLKEETNKVDSDSYVTLFSKAGFFSRMSFWWMNPLMKRGKKNTLKEEDIPKLSEADQAGSCYFLFLDQLNRQKQKEPSSLPSVLSTIFMCYWKEILISGLFAMLKVITLSSGPLLLNSFILVAEGHGSFKYEGYVLAIALVFTKIIESLSQRQWYFRTRLIGVKVRSLLIAAIYKKQLRLSNAARLTHSGGEIMNYVNVDANRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVIVLTVLCNTPLAKLQHKFQRKLMVAQDERLKATSEALVSMKVLKLYAWETNFRNAIEKLRDVELERLSVVQLRRSYSNFLFWASPVLVSAASFGACYLLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQSENSRRGFSDNKRGSILINSANFSWEDNLSKPTLRNINLEVRPGKKVAICGEVGSGKSTLLAAILREVPITRGTIEVHGKFAYVSQTAWIQTGTIRENILFGAAMDAEKYQETLHRSSLMKDIELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPCSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSNGEIIEAAPYHDLLSSSQEFQDLVNAHKETAGSEKLVDVTSSSRNSNTVTEISKIQMEKQCETSQGSQLIKKEEREKGNRGFKPHLQYLTQNKGYIYFSVASISHLIFTIGQIFQNIWMASSVDNPYVSTLKLIAVYLLIGFISACFLFIRSLVVVAMSIRTSKSLLLQLLDSLFRAPMSFYDSTPLGRILSRVSSDLSTVDLDVPFGLIFAVGATATCYSNLAVIAAITWQVLFISVPMLYIAFRLQRYYYATAKELMRMNGTTRSYVANHLAESIAGVVTIRAFEEEDRFFAKNLDLIDVNASPYFHTYAANEWLMLRLETISAVVFASAALCMVVLPPGTFNSGFIGMALSYGLSLNSSLVFSIQNQCTLANQIISVERLNQYMHIPSEAPEVIEGNRPPTNWPAEGKVEIHDLKIRYQPDSPLVLRGITCTFEGGHKIGVVGRTGSGKSTLIGALFRLVEPAGGKIVVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSHHSDQEIWEVLGKCQLREVVEEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIKGEFADCTVITVAHRIPTVMDCTKVVAIHEGELVEYDDPMKLMKREESLFGQLVKEYWSHLQAAESH 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00691 1496 SMART AAA_5 668 841 IPR003593 GO:0016887
Vian3g00691 1496 SMART AAA_5 1276 1476 IPR003593 GO:0016887
Vian3g00691 1496 FunFam ABC transporter C family member 3 1233 1485 - -
Vian3g00691 1496 FunFam ABC transporter C family member 5 899 1231 - -
Vian3g00691 1496 FunFam ABC transporter C family member 10 624 877 - -
Vian3g00691 1496 FunFam ABC transporter C family member 10 310 623 - -
Vian3g00691 1496 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524|GO:0016887
Vian3g00691 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 864 IPR003439 GO:0005524
Vian3g00691 1496 Gene3D - 1234 1485 IPR027417 -
Vian3g00691 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1250 1484 IPR003439 GO:0005524
Vian3g00691 1496 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 250 1484 - -
Vian3g00691 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 327 607 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian3g00691 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 864 IPR027417 -
Vian3g00691 1496 SUPERFAMILY ABC transporter transmembrane region 932 1230 IPR036640 GO:0005524|GO:0016020
Vian3g00691 1496 Gene3D - 635 870 IPR027417 -
Vian3g00691 1496 Pfam ABC transporter 659 793 IPR003439 GO:0005524
Vian3g00691 1496 Pfam ABC transporter 1267 1415 IPR003439 GO:0005524
Vian3g00691 1496 Pfam ABC transporter transmembrane region 327 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian3g00691 1496 Pfam ABC transporter transmembrane region 936 1174 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian3g00691 1496 CDD ABC_6TM_ABCC_D2 932 1225 IPR044726 GO:0140359
Vian3g00691 1496 CDD ABC_6TM_ABCC_D1 328 615 IPR044746 GO:0140359
Vian3g00691 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 944 1213 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vian3g00691 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1240 1479 IPR027417 -
Vian3g00691 1496 SUPERFAMILY ABC transporter transmembrane region 315 620 IPR036640 GO:0005524|GO:0016020
Vian3g00691 1496 Gene3D ABC transporter type 1, transmembrane domain 898 1231 IPR036640 GO:0005524|GO:0016020
Vian3g00691 1496 Gene3D ABC transporter type 1, transmembrane domain 298 624 IPR036640 GO:0005524|GO:0016020
Vian3g00691 1496 CDD ABCC_MRP_domain1 641 841 - -
Vian3g00691 1496 CDD ABCC_MRP_domain2 1248 1468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00691 Vian-Chr3 7067781 7074083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00691 628 884 Calmodulin-binding Proteins AT2G36910 31.183 1.86e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00691 K05666 - gmx:100784336 2642.84