Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00677 ATGGCGTCAGTGGATACGGATTCCTTCGTTGAAAAGATGGAAGAGAAGTTCCACGATAACAATTCCGATTCCGAATCCTATTCCGATTCCGACGACGATCACGCCAATAGGCCGCCGCTCAAGGCCTCCGGATCCAACGTTTACCGCCTCTTCGGCCGAGAACAGCCCGTCCATAAGGTCCTTGGCGGTGGAAAACCTGCCGATATTTTGCTATGGAGGAATCGGAGAACCACAGGAATTGCACTTGGTGCTGGCACTGCCGTTTGGGTTTTCTTTCAGATGATGGAATACCACCTGATAACTTTCATTTGCCATTTATTAATTATGTTTCTCGGTGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTCCACTGCACATCCCGCATGTAGTAATTCCCGAGGATTGCGTTCTTGAGGCTGCTTCTGCTATAAGAATTGAAATTAATCGAGCCTTCGTTCTTTTGCGGGAAATTGGAACAGGGAGAGATTTAAAGAAGTTTCTTAGCGTTATTGCTGTATTATGGGTTATCTCAGTTATTGGGGGTTGGTTCCACTTCTTGACCTTATTTTATCTATTCTATTTGTCACTGTTCACATTGCCACTGCTGTATGAGAAATACGAAGATCAGGTTGATGCAATGGGTGAGAAGGCAATGATTGAGTTAAAAAAACAATATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCGGGACTCAAAAAAGATTAG 750 0.44 MASVDTDSFVEKMEEKFHDNNSDSESYSDSDDDHANRPPLKASGSNVYRLFGREQPVHKVLGGGKPADILLWRNRRTTGIALGAGTAVWVFFQMMEYHLITFICHLLIMFLGALFLWSNASVFIHKSPLHIPHVVIPEDCVLEAASAIRIEINRAFVLLREIGTGRDLKKFLSVIAVLWVISVIGGWFHFLTLFYLFYLSLFTLPLLYEKYEDQVDAMGEKAMIELKKQYAVFDAKVLSQIPIAGLKKD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00677 249 Coils Coil 243 249 - -
Vian3g00677 249 PANTHER RETICULON 42 242 - -
Vian3g00677 249 Pfam Reticulon 67 221 IPR003388 -
Vian3g00677 249 MobiDBLite consensus disorder prediction 15 41 - -
Vian3g00677 249 ProSiteProfiles Reticulon domain profile. 66 249 IPR003388 -
Vian3g00677 249 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00677 Vian-Chr3 6852866 6855079 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00607 9 7245880 7247759 Vian3g00677 3 6852866 6855079 ECH
Vian1g03871 1 61849017 61850789 Vian3g00677 3 6852866 6855079 ECH
Vian3g00677 3 6852866 6855079 Vian3g00677 3 6852866 6855079 ECH