Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00665 ATGGCGGCAGGACTCTCCACCGCCGCGAACTTAAAGCCCTACAGTCTGCTCCAACCTCCAATTTCTCTCCCTAAACCAAACCAATCACTTTTCTTCCACCCCTTAAAACCTTTCCATCGAAGCACAATCCTTCGGCTAAGACCCCCCCGAAGAACGAGTGGCTTCTCCGTTTGTGTCCTCATGGAGGATCCCAAACGGAACCTCCAGATCAAAACCAACGAAGAAGAAGAACAAGAAGTGAATCCTGGATCTGTGTCTGCAGGAGTGGAAGAGAAATTGGCCAGAAAGAGGTCCCAGAGGTTCACTTACCTCGTGGCGGCTGTTATGTCTAGCTTTGGCATCACCTCCATGGCAGTCTTCGCCGTTTATTATAGATTCTCCTGGCAAATGGAGGGTGGAGATTTTCCTTGGTCTGAAATGTTAGGCACATTTTCCCTCTCCGTTGGAGCTGCCGTGGCGATGGAATTTTGGGCAAGATGGGCTCATAGAGCACTTTGGCATGCTTCCTTGTGGCACATGCATGAGTCGCACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGATGTTTTTGCAATTGTTAACGCTGTTCCTGCGATCGCTCTTCTCTCATACGGTTTTTTCCACAAGGGTCTGGTCCCTGGCCTCTGCTTCGGTGCAGGCCTTGGAATCACGGTGTTCGGGATGGCCTACATGTTTGTCCACGATGGACTGGTTCATAAGAGATTCCCAGTGGGCCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTCCACCATACAGACAAATTCAACGGTGTGCCATATGGGCTGTTTTTGGGACCAAGGGAACTTGAAGAAGTGGGAGGGGTTGAAGAGCTAGAGAAAGAGATAAGTAGGAGAATAAGATCGGGTTCATGA 915 0.5027 MAAGLSTAANLKPYSLLQPPISLPKPNQSLFFHPLKPFHRSTILRLRPPRRTSGFSVCVLMEDPKRNLQIKTNEEEEQEVNPGSVSAGVEEKLARKRSQRFTYLVAAVMSSFGITSMAVFAVYYRFSWQMEGGDFPWSEMLGTFSLSVGAAVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPRELEEVGGVEELEKEISRRIRSGS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00665 304 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Vian3g00665 304 Pfam Fatty acid hydroxylase 150 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00665 Vian-Chr3 6740447 6742298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00665 1 220 Chloroplast and Mitochondria Gene Families AT4G25700 59.402 4.37e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00665 K15746 - gmx:547758 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01023 8 27106388 27114923 Vian3g00665 3 6740447 6742298 ECH
Vian3g00665 3 6740447 6742298 Vian3g00665 3 6740447 6742298 ECH
Vian8g01023 8 27106388 27114923 Vian3g00665 3 6740447 6742298 PCT