Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00640 ATGAATATCCTCGTGGCGCTCGCATTCTTGTGCCTGGCAACATTGGCGCCATGGCGCGTTCGCTCGCAACAACAGAGGCTTCTCGTGAACATGACGCTCGTTACCAAGGCCAAAGCTAGCGGCGCTCTGTGTTTGGACGGAAGTTTACCGGCGTATCACTTGGACAGAGGATTCGGTGCTGGTGAAAACAACTGGCTTCTTCAATTTGAGGGAGGTGGATGGTGCAATGACTTAAAATCATGCTTGGAGAGAGCCAAAACTCGGAGGGGTTCATCAAGTTATATGGTCAAATTGGAGGTGTTTTCTGGTATTTTAAGCAACAATGCCACCCTTAATCCTGATTTTTACAACTGGAACCGTGTAAAGCTGAGATACTGTGATGGAGCCTCGTTTACAGGAGACGCTGTGTTCTCTAACAAGACAACAACTCTTCATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGACGACCTTCTACCACAAGGTTTGGGAAAGGCACGGAAGGTATACTTCAATTCTGTAGAGTTCGCTTTTGTTCATTCTCGCAACTCTGAACTGAACATGAGTGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCAACCTTTCACCATTGTGACGACTTCGCCAAGCGTTTGCCAACGGATGCTAGTGTTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGACATCAGTTTGAACCACACCATGAGGTTTCTCGTTAAAAGTCTAGTTCGGTTACAGGGGATAGAGCAGAACCTGAATAGAAATTGCACCAGAGAACAGTACTTTCCAGCCTTGTGCTTCTTTCCACAATATGCGTTGAAATACATATCAACACCATATTTTATTTTGAACTCTGCCTATGATGTATTCCAATTCCATCATATATTGGCGCCACCCTCTGCGGATTTGCACGGACACTGGAACAAGTGCAGGCTGAACCCGGCTGCATGTACAGCAGACCAAATTGCTATATTGCAAGGTTTTAGGCTCGACATGCTTGGAGCTTTGAAACCATTCTATATGAATTCAAGAAGAGGGGGGGTGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACAACAGGATACATGGTTTAGAGATGATTCTCCTAGAATAAACAACAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACATAAGCAAGGAAATAGACTGTCCATATCCATGCGATGGAACTTGTCATAATACTATACCCGAACCTAAGCTCAGGTGA 1266 0.4415 MNILVALAFLCLATLAPWRVRSQQQRLLVNMTLVTKAKASGALCLDGSLPAYHLDRGFGAGENNWLLQFEGGGWCNDLKSCLERAKTRRGSSSYMVKLEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFSNKTTTLHFKGQKIWEAIIDDLLPQGLGKARKVYFNSVEFAFVHSRNSELNMSALLSGCSAGGLATFHHCDDFAKRLPTDASVKCLSDAGFFLDERDISLNHTMRFLVKSLVRLQGIEQNLNRNCTREQYFPALCFFPQYALKYISTPYFILNSAYDVFQFHHILAPPSADLHGHWNKCRLNPAACTADQIAILQGFRLDMLGALKPFYMNSRRGGVFINSCFAHCQSEQQDTWFRDDSPRINNKTIAEAVGDWYFSRNISKEIDCPYPCDGTCHNTIPEPKLR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00640 421 PANTHER NOTUM-RELATED 12 413 IPR004963 GO:0016787
Vian3g00640 421 Pfam Pectinacetylesterase 190 396 IPR004963 GO:0016787
Vian3g00640 421 Pfam Pectinacetylesterase 22 170 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00640 Vian-Chr3 6490295 6510576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00640 1 416 Carbohydrate Esterase AT5G23870 61.483 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00640 K19882 - gmx:100794453 697.967