Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00638 ATGGAGTCTCTAGGGCTAGCTGGGGTTCTTGTTGCCTTCTCGGCTGCACTTTGCCTCTTCTTGCTCTTCATACTAACTTTTTCTTGGTGGGTTTTCCCTAACCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGTCCAATCCCAAGTTTTCCTCTTGGAAACATTAAAGAGATGAAAACAAAGAATAACATTCAATCTTCAGTTGCATCCTCAAATCTCACTCATGATATACACTCTAACGTTTTCCCCTACTTTTCTAGCTGGCAGAAATCACATGGTAAAGTTTTTGTGTACTGGTTGGGCACGGAGCCATTCCTGTACGTTGCAGAGCCAGAGTTCTTGAAGAAAATGTCGACAGTGGTGGTGGCCAAGCGATGGGGAAAACCAAGTGTGTTTAGAACTGACAGAGACCCCATGTTTGGGAGTGGTTTGGTCATGGTTGAGGGCAACGAATGGGTTCGTCACAGGCACATTGTTGCCCCTGCCTTCAATCCCATTAACTTGAAGGACATGGCGAACATGATGGTTGATTCCACGAATCAAATGATAGACAGATGGTTTACCCGAATAAACTCTGGGAACCCCGAAATCGACGTGGAGAGAGAGATTATAGCAACGGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGATGACAATGCAAGAGATGTTTTTGACAAACTAAGAGCCTTGCAAATGACCCTTTTTAAGACCAATCGATACGTAGGTGTTCCCTTTGGGAAGTATTTCAACGTAAAGAAAACATTAGAGGCGAAGAAACTCGGGAAAGAAATCGACGAACTCTTGTTGTCGATCATAGAATCTCGGAAGAAGTCGGGGACGAAAAATGGTCAGCAAGATCTGTTAGGTCTGTTGCTGCAAGAAAATCACGAGGTGGATGGAAGGTCGGGTAAGACGTTAACATCGCGAGAAGTTGTTGACGAATGCAAGACCTTCTTCTTCGGAGGGCATGAAACCACAGCACTTGCCATCACGTGGACCTTGCTGCTTCTAGCCATGCACCCAGATTGGCAAAACCAGTTGAGAGATGAGATACGAGAGGTGGTGGGGAACTCTGAAGAACTTGATATTTCTATGCTCTCTGGTTTAAAAAAGATGAAATGGGTTATGAATGAAGTTCTAAGACTGTACCCACCAGCACCAAACGTGCAGAGGCAAGCAAGAGAAGACATAAAAGTGGATGATGTAACGGTGGCTGATGGAACGAACATGTGGATAGATGTGGTGGCCATGCACCATGACCCTGAACTATGGGGAGAGGATGCGAATGAGTTCAGGCCAGAGAGGTTCATGAATGATGTGAATGGTGGATGCAAGCACAAGATGGGTTATTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGAAATCTTACCTTTATGGAGTACAAGATCGTTTTAACCCTTCTTCTCTCTAGGTTCACTTTCAAGACTTCACCTGCTTACAATCACTCACCATCTATTATGCTCTCCCTAAGGCCTAGCTATGGTCTTCCACTCATTGTTCATCCACTTTAA 1554 0.4459 MESLGLAGVLVAFSAALCLFLLFILTFSWWVFPNQTLKKLKKCGLGGPIPSFPLGNIKEMKTKNNIQSSVASSNLTHDIHSNVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPEFLKKMSTVVVAKRWGKPSVFRTDRDPMFGSGLVMVEGNEWVRHRHIVAPAFNPINLKDMANMMVDSTNQMIDRWFTRINSGNPEIDVEREIIATAGEIIARTSFGMKDDNARDVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIESRKKSGTKNGQQDLLGLLLQENHEVDGRSGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHPDWQNQLRDEIREVVGNSEELDISMLSGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDVTVADGTNMWIDVVAMHHDPELWGEDANEFRPERFMNDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKTSPAYNHSPSIMLSLRPSYGLPLIVHPL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00638 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vian3g00638 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 SUPERFAMILY Cytochrome P450 77 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00638 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 509 - -
Vian3g00638 517 Pfam Cytochrome P450 80 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00638 Vian-Chr3 6453346 6455727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00638 12 517 Cytochrome P450 AT5G52400 59.570 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00638 - - gmx:100785284 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00638 3 6453346 6455727 Vian3g00638 3 6453346 6455727 ECH
Vian8g01066 8 28104710 28108101 Vian3g00638 3 6453346 6455727 PCT