Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00589 ATGCAGGGACAGTTCCTGGACTCAACAGCATTAGTGTTTGACAATGACTACTACAAACAACTGTTGGCTGTAAAAGGTGTGTTTTTTTCGGATCAATCACTTGTTGGTGATCACATGACTAAATGGTTTGTTGAAGCATTTGCGAAAGATCAGGGCTTGATCTTCAAAGAGTTCACAGCTTCAATGTTGAAACTTGGAAATCTAAGAGGCTCTAGAAACGGAGAAGAGTTAATTGCAGGATGGCAAACTGAGAGAGACAGTGAACAGAAACCAATTTGCCCTGGTTTTTGTTTTCTTTCCCACCGCTTTAGTTAA 315 0.4032 MQGQFLDSTALVFDNDYYKQLLAVKGVFFSDQSLVGDHMTKWFVEAFAKDQGLIFKEFTASMLKLGNLRGSRNGEELIAGWQTERDSEQKPICPGFCFLSHRFS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00589 104 SUPERFAMILY Heme-dependent peroxidases 5 76 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian3g00589 104 PRINTS Plant peroxidase signature 20 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00589 104 PRINTS Plant peroxidase signature 4 19 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00589 104 PRINTS Plant peroxidase signature 60 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00589 104 Gene3D Peroxidase, domain 2 2 65 - -
Vian3g00589 104 PANTHER - 7 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00589 104 Pfam Peroxidase 5 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00589 104 ProSiteProfiles Plant heme peroxidase family profile. 8 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00589 Vian-Chr3 5888176 5888490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00589 3 75 Peroxidase AT5G51890 60.274 7.95e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00589 K00430 - gmx:100799516 135.961