Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00587 ATGATGATGATTGTCGAGGTGCAAAACGCAGCCCGCGGTTATTCGTTGTTCGCAGTACCAGACGTACAGAGAAGAAGCGCCACGACTACCCGCACCCCGAGACCAATCGCCAGCGATCACCACAAATCTCAGGGCGCCTTCACCGTCACCCCCTCCGCCGCACTCCACGAAGGGCCAGAGTTTCATTACGTCACAACCATGTTGCCCCGTACCACTGGGTCCCACAGCAACGCCACCACGCGTATGCCCCACCTCCATTTTCATTGGTTCTCCCCCACCCACCCTTTGGACCCTTCACTCTTTCACCGTCTCGAGCGCTACCCAACATCCCATTCCTTTCTGTTGGATTTGGTGGACGAGTTGCTGTCGGAGAGTCTGGTTAGGCCGAAGCGTTTCAGAGACAGGGTTCGGAGTTTGGCACGTGCGAAATGCGAGGTTTTGGAGGGCATTAATGGTTTGGTAGAGATGGAGGAGATGAGGGAAAAAGAGGAAGAAGAAGAAGAGATGCAGTTTAATGCCCATGGCTTGGCTGTGGCTGTGGCTATGGCATGGATCGTTCATCCGTGA 567 0.5485 MMMIVEVQNAARGYSLFAVPDVQRRSATTTRTPRPIASDHHKSQGAFTVTPSAALHEGPEFHYVTTMLPRTTGSHSNATTRMPHLHFHWFSPTHPLDPSLFHRLERYPTSHSFLLDLVDELLSESLVRPKRFRDRVRSLARAKCEVLEGINGLVEMEEMREKEEEEEEMQFNAHGLAVAVAMAWIVHP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00587 188 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 32 170 - -
Vian3g00587 188 Pfam Domain of unknown function (DUF4378) 60 156 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00587 Vian-Chr3 5862333 5863086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00587 30 154 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 30.178 3.23e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00587 - - vun:114190841 187.193