Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00586 ATGGGCAAGGAGTGGCATTGGGGTGGAAGGTCCTCCAAGAGGGGTGGAGAAGCTCAAACAGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAGGCTTTCGATTTTCATCCATTTCACTTTTCCATTAACCACCAGCCATCCTCTTTCAAGTCTCGCACCCGAGAAGACCACACTCTCTCTAAAGGAGCTGAAGGACCAAGGCATAGCTTGGAGTCAGAAGATGGTACTACAGTGTCATCAATCTCAAAAGAAGCAAATTTTAAAATACCAAAGAACATTCAGATCAGAACAGGAGGGAGCTCAAGATCAAAAACAGAAATTAGTGATCTTTCGTCAGAAATCAGTGTCTCTCCAGGGACCAAGACACCGACTTTGGTTGCAAGGTTAATGGGTCTGGATCTTCTTCCTGATGCACACTCCCCTTCTTCCCCGTGCCTTTCCACTCCAAACCTTTATAGATCACGACAACATATCAAACTAATCAAACATAGAAACAGCACGGGAAGTGACTTCTTGCCTGGGGTTCCTAAAATGTCCTCTGCAAGAAAATCGGATGTTGAGCATAGACTCTCACTCCAAATCAACAAGGAGAACACAGTTCCGTATGAGGATTTTGAGGTTCCTCTGTTTTCTTTTACAAAGAGAAAATATGATGAGAACAATAGCCGGAGTCCAAGTCACTATGCCAAGCAAATTGTCAAACAGGTTAGAGAAAGTGTGAGCAGAAAGGTTGGACGCGACATCACCAACACTATCAAAAACAGAGACCATGAAGAAGAGGAATGTGTAAGCAAAATCAAATTCAAGAAAACTTCAAAAACTTCAGTGAATGAATCTTGCCCTGGAAAACTTTCAAACTCGTCTTATTCCCCAAGGCTCAGCAGATTTATTGAATCCAAACAAAAATCAAGCACAAAACCATCGCCAACAACTCCAAAAAATCAAAGCACACACTCAGTGCTAAAACCACAATCACCTCCACGTGCGATCAACATTGAAACTGAGCTTTCAGAAGTTTCTACAAAGCCAAAGCCTCAGGCATTGGCCAAGAAAGAGTTGCAGAACCAAAAAGCAGTCACAAAATACAAGAAAACAACCTTTGGAAAGTCGAGTACGAGAGTCAATATGCCTCCACAAACATCAATTAGAAACCAGCAAGAAGAGCCATTTATTATTCGTTATCCATTAGTCACTAAAGTCAATGACATCAAAACCAAAAAGAAGAGAACTCTTCCACTTTCAAGCGATCTTTTTAATAGTCACAACACGGTTCCAAATCTTCTCCCTGTCAAGATAGGTCTTTCTCCTCAAAAACAGACACGGGTGAGTTATGCTGATGAATGTCGAGATGCAAAACGCAACACACAGTTATTTAGTTGTTCGCGCCAGACGTACAGAGAAAAAGCGCCACGACCACCCGCACCCCGAGGACCAACAACCTGCGATCACGACAAATCTCACGGCGCCTTCACCACCATCTCCTCCGCCGCACTCCACGAAGGACCAGAGTTTCACTACGTCACGATCATCTTGTCCCGTGCCACTGGGTCCCACAGCAACGCCACCACACATATACCCCACCTCCATTTTCAGTGGTTCTCTCCCACCCACCCCTTGGACCCTTCACTCTTTCACAGTCTGGAGCGCTACCCAACATCCCATTCCTTTGTCTCTTTCCCAGAAGACAACAAAGATTGCGTATTTGAGCGGAAACACGGGCTGGGTCCGCGCTGCAACCGTAGATTGCTGTTCGATTTGGTGGACGAGTTGCTGTCGGAGATTCTAGTTAGGCCGAAGCGTTTCAGAGGGAGGCTGTTGGAGACGGTGTGGGAGAGGGTTCGGAGTTTACCACGTGCGAAGTGCGAGGTTTTGGAGGACATTGATGGGTTGGTAGAGATGGAGGAGATGAGGGAAGAAGAGGAAGAAAAAGGGTTGGTGAAGGAGATGGAGGGGAACATAGTGGAGTGGTTGGTGCATGAAACGTTAACCGTTATGAAGAGATGCGATGCCCTTGGCTGTGACTACGGCATGGATCCCTCATCCGTGGAAGCCGTGGCGGTGGGTCCCATTGTGAAACCATGA 2085 0.4614 MGKEWHWGGRSSKRGGEAQTEIPSGCMCAVFQAFDFHPFHFSINHQPSSFKSRTREDHTLSKGAEGPRHSLESEDGTTVSSISKEANFKIPKNIQIRTGGSSRSKTEISDLSSEISVSPGTKTPTLVARLMGLDLLPDAHSPSSPCLSTPNLYRSRQHIKLIKHRNSTGSDFLPGVPKMSSARKSDVEHRLSLQINKENTVPYEDFEVPLFSFTKRKYDENNSRSPSHYAKQIVKQVRESVSRKVGRDITNTIKNRDHEEEECVSKIKFKKTSKTSVNESCPGKLSNSSYSPRLSRFIESKQKSSTKPSPTTPKNQSTHSVLKPQSPPRAINIETELSEVSTKPKPQALAKKELQNQKAVTKYKKTTFGKSSTRVNMPPQTSIRNQQEEPFIIRYPLVTKVNDIKTKKKRTLPLSSDLFNSHNTVPNLLPVKIGLSPQKQTRVSYADECRDAKRNTQLFSCSRQTYREKAPRPPAPRGPTTCDHDKSHGAFTTISSAALHEGPEFHYVTIILSRATGSHSNATTHIPHLHFQWFSPTHPLDPSLFHSLERYPTSHSFVSFPEDNKDCVFERKHGLGPRCNRRLLFDLVDELLSEILVRPKRFRGRLLETVWERVRSLPRAKCEVLEDIDGLVEMEEMREEEEEKGLVKEMEGNIVEWLVHETLTVMKRCDALGCDYGMDPSSVEAVAVGPIVKP 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00586 694 MobiDBLite consensus disorder prediction 46 80 - -
Vian3g00586 694 MobiDBLite consensus disorder prediction 465 486 - -
Vian3g00586 694 MobiDBLite consensus disorder prediction 1 20 - -
Vian3g00586 694 MobiDBLite consensus disorder prediction 50 72 - -
Vian3g00586 694 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 667 - -
Vian3g00586 694 Pfam DUF761-associated sequence motif 112 141 IPR032795 -
Vian3g00586 694 Pfam Domain of unknown function (DUF4378) 504 661 IPR025486 -
Vian3g00586 694 MobiDBLite consensus disorder prediction 299 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00586 Vian-Chr3 5853085 5856402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00586 94 678 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 30.534 9.68e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00586 - - vun:114190841 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00586 3 5853085 5856402 Vian3g00586 3 5853085 5856402 ECH
Vian8g01153 8 29972545 29975683 Vian3g00586 3 5853085 5856402 PCT