Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00568 ATGAAGCTCACAGATTTTCTCTTTGCACTGAAACCACTCTTTGCAACAGTAATAGGTGTTATCTCAGTTGCTGTAATTACCAAAGTCCTTGGAATTAGATTTTTCGACAAGAAAAGGAAGTACCATCCGGTTGCTGGCACAGTCATACACCAACTTTTCAACTTTACCAGACTCCTGGATTACATGATCGACCGTACAAACCACAGGAAAACTTATAGGTTGCTTAGCTTCAACAGAAGTGAGGTCTACACTGCAGACCCTGTTAATATTGAGTATTTCCTTGCCACAAATTTCTCAAACTACGGCAAGGGTTGGTATCACCATAGCGTCTTGTCAGATTTTCTTGGAGATAGTATATTCACGGTGGATGGGGAGCAGTGGAGACATCAGAGAAAGACAGCAAGCTATCAATTCTCAACGAAAATGTTGAGAGACTACAGCAATTGGGCGTTCAAATCTAATGCACTAAAACTTGCAGAGATAGTTTCTGAAGCTGCAATCTCAGATAATATTATTGACATGCAGGAATTGTTCATGGAAGCTACTCTAGATTCTGTATGCAAGGTTATCTTGGGTGTTGATCTGGACACCATGCGTGGAACCTATAAAGAAGGCACGGAGTTTTCCAATGCGTTTGATGAAGCAAGTGCTGCTATCATGTACCGGTATTTTAACTTTCTCTGGAGAATTATGCGGTTCTTTAACATTGGATCAGAAGCAGTTCTTAGGAAAAGTTTAAGTGTGATGGATGAATTCGTTTATGAACTAATCAGAAACAAGATGGAGCAAGCCCAAAAGCCACAAGATAATTTACCTGGGACGAAAGGAGACATGTTGTCAAGGTTTATAGAATTGAAAGAAACCGATCCAAAATACCTTAGAGACATTTCCTTGAGCTTTATCCTTGCAGGGAAAGATACAACAGCAATTACTCTTTCCTGGTTTTTTTATGAGATTTGCAAGAACTCTCACGTGCAGGAGAAGATTGAACAAGAAATTAGAGAGACAACAAATGTAGCAGCTGGGTCAACCATTGACGAACTTGCAGCAAGAGTAACTGAAGAGAACCTGGAAAAGATGCCGTACCTACATGCCTCATTGAATGAAACACTCAGGCTCCATCCAGCAGTTCCAGTGCAAGGTAAGTTTTGTTTCTCAGATGACACGTGGCCAGATGGATTTAGCGTGAGGAAAGGTGATCTTGTGTCATTCCAACCGTATGTTATGGGAAGGATGAAGTTCTTGTGGGGCGAAGATGCCGACAAATTCAGGCCAGAGAGATGGCTCGATGAGAATGGAATTTTGAAGAAAGAAAGCCCTTTTAAGTTCACAGCCTTTCACGCGGGTCCAAGAATTTGCCTGGGGAAGGAGTTTGCATACAGACAGATGAAAATATACTCTGCACTCCTCTTAGGTAGTCACAGCTTCAAACTGGCAGACCAAAACAAACCAGTGAAATACAGAACAATGCTTACTCTACAAATTGAAGGTGGCCTGCACGTTTATGCTTCTCGAAGAGAGTAA 1524 0.4154 MKLTDFLFALKPLFATVIGVISVAVITKVLGIRFFDKKRKYHPVAGTVIHQLFNFTRLLDYMIDRTNHRKTYRLLSFNRSEVYTADPVNIEYFLATNFSNYGKGWYHHSVLSDFLGDSIFTVDGEQWRHQRKTASYQFSTKMLRDYSNWAFKSNALKLAEIVSEAAISDNIIDMQELFMEATLDSVCKVILGVDLDTMRGTYKEGTEFSNAFDEASAAIMYRYFNFLWRIMRFFNIGSEAVLRKSLSVMDEFVYELIRNKMEQAQKPQDNLPGTKGDMLSRFIELKETDPKYLRDISLSFILAGKDTTAITLSWFFYEICKNSHVQEKIEQEIRETTNVAAGSTIDELAARVTEENLEKMPYLHASLNETLRLHPAVPVQGKFCFSDDTWPDGFSVRKGDLVSFQPYVMGRMKFLWGEDADKFRPERWLDENGILKKESPFKFTAFHAGPRICLGKEFAYRQMKIYSALLLGSHSFKLADQNKPVKYRTMLTLQIEGGLHVYASRRE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00568 507 Gene3D Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS E-class P450 group IV signature 453 471 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS E-class P450 group IV signature 294 320 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS E-class P450 group IV signature 360 376 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS E-class P450 group IV signature 394 408 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vian3g00568 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00568 507 CDD CYP86A 70 499 - -
Vian3g00568 507 PANTHER CYTOCHROME P450 29 501 - -
Vian3g00568 507 Pfam Cytochrome P450 71 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00568 Vian-Chr3 5681132 5683816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00568 15 506 Cytochrome P450 AT2G45510 49.203 1.84e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00568 - - pvu:PHAVU_007G063800g 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00568 3 5681132 5683816 Vian3g00568 3 5681132 5683816 ECH