Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00537 ATGATGGAGGGAGATACTATATGTGCAGCAACAACAAATATCAGAGATGAGGGGATCGATCTAACCCAAATCTCTCTTCGACTCATTAGTCTTGATGATCTTGATTATGTAATGGCGTGGACCACAGATGAAAAAGGTAGGAACAGGCACAAATCTGCCGAACTTGGCTACGCTTTAGGCTCCAGATACTGGGGTAAAGGGATTGCAACACATGTTGTGGAACAAGTTGTTAAAGCTGCATTTACAGAGTTTCCACACTTGGAAAGGCTTCAAGCTCTGATCTTTGTGGAAAATGTGGGTTCTCAAAGGGTGCTGCTGGACAAGGCTGATTTTCAAAGGAAGGGCGTTCTCAGGATGTATGCCATCATTAAAGGAAAACGTAGAGATCTGGCTAGTTACAGTGTTCTCAACAATGATTGTCGTAGTTGA 429 0.4312 MMEGDTICAATTNIRDEGIDLTQISLRLISLDDLDYVMAWTTDEKGRNRHKSAELGYALGSRYWGKGIATHVVEQVVKAAFTEFPHLERLQALIFVENVGSQRVLLDKADFQRKGVLRMYAIIKGKRRDLASYSVLNNDCRS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00537 142 Pfam Acetyltransferase (GNAT) domain 49 105 IPR000182 GO:0016747
Vian3g00537 142 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 136 IPR016181 -
Vian3g00537 142 Gene3D - 36 141 - -
Vian3g00537 142 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 51 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00537 Vian-Chr3 5339988 5340570 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian3g00537 Acetyltransf_3 1.6e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00537 - - vun:114190225 197.978