Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00518 ATGCCCACCCTGTTCTCCAAACGCCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCACCACCCTCACCCTCCACCTTCCACCGACAACTCCACCACCTTCACCCACCCCTCTTCTTCTTCCGACGACGACGACCATTCCTCCTCCACGGAGCCTGACTTCGCCTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCGGGCACTTCCAACTCCATCGTCGAATCCCCGGACACCCGCACCTTCGTCCCCACGGGCGGCGGCGTCACAGTCCCCAAGTATTCCCTCAACCCCTACGTGGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGCCAAGTCGACATCACCCAAGACTGGGACTACCTCCACGAACTTCTCCTATGCTACCTCGCTCTCAACCCCTCTCACACCCACAAGTACATCATTCGCGCCTTCACCGACCTTGTCCTCCAACTCCTCTCCTCCACCCCCTGTCGGACGCACAACACCCACCACCACCGGCGCCACCTTTTCGTATCTTTGTCTTGGGTAAAAGGGGTACCGGAGCGGCGATTGTATTTTGACGATCAAAAAGAGAAATTTAGCGAAACGAAGGATAAGCAGCTTTTTCACCCCATGAAAATAATGCACCCATCAAAAGCAGAAACAAGTACAAAAACAATCAAGGACGAGGGAGAGAGCAAAACTGACAAGTGA 714 0.5448 MPTLFSKRLHLCFFKLKYPTILHHPHPPPSTDNSTTFTHPSSSSDDDDHSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFVPTGGGVTVPKYSLNPYVDFLRSMHEMIRSRQVDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSSTPCRTHNTHHHRRHLFVSLSWVKGVPERRLYFDDQKEKFSETKDKQLFHPMKIMHPSKAETSTKTIKDEGESKTDK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00518 237 MobiDBLite consensus disorder prediction 222 237 - -
Vian3g00518 237 NCBIfam uncharacterized plant-specific domain TIGR01568 93 160 IPR006458 -
Vian3g00518 237 MobiDBLite consensus disorder prediction 27 41 - -
Vian3g00518 237 MobiDBLite consensus disorder prediction 211 237 - -
Vian3g00518 237 MobiDBLite consensus disorder prediction 25 54 - -
Vian3g00518 237 Pfam Transcriptional repressor, ovate 99 158 IPR006458 -
Vian3g00518 237 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 159 IPR038933 GO:0045892
Vian3g00518 237 ProSiteProfiles OVATE domain profile. 95 157 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00518 Vian-Chr3 5017489 5019012 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian3g00518 Ovate 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00518 - - gmx:102666896 256.529