Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00486 ATGGCTTCCACCAACCCAAAAGAGATCGTTGCAGAGCTACCTACCTATATCAGAGTCTTCAGTGACGGCACCGTGGAAAGGCCAAGAGAAACACCCTTTGTCCCACCTTCAATTGATGACCCTCTAACAGGGGTCTCATCCAAAGACATCGTCATCTCTCAAAGCCCTCCTGTTTCAGCTCGAATTTACCTTCCCAAACTAGCCCCAACCAGTGACCAAGACCATCCTCAGAAGTTGCCCATCTTGGTCTACTTTCACGGTGGTGGATTTTTCTTTGAGTCCGCTTTCTCCGAACTATACCATCGCTACTTCAACATCTTCGTTTCCCAAACAAACGTCATAGCGGTTTCCGTGGAGTATAGGCTCGCCCCGGAGCACCCTCTCCCCGCATGTTACCATGATTGCTGGGACGCTCTCAAATGGGTTGCGTCCCATTCCAATCAAAACAACGCCACCAATGAAGATCCTTGGCTGATTTCCCACGGTAATTTCCAAAGAGTTTTCATCGGGGGGGACAGTGCAGGTGGGAACATAGTTCACAACATTGCCATGCGTGCTGGTACTGAACCCTTACCTTGTGATGTTAAAATATTAGGAGCTATTTTCTCCCATCCTTACTTCTGCAGTTCGGAGCCAATTGGATCCGAAGCTGTTACAGGGCACAAACAGCGTTTGTTCTGTTTAGTTTGGGACTTTGTGTACCCTTCTGCGCCGGGTGGCATTGATAACCCCATGGTCAACCCCTTCGCTCCTGGGGCACCAAGCTTGGATGGACTTGGGTGTTCCAAGATTATTGTGTGTGTGGCTAGCGAGGATAAAATTAGGGATAGAGGGGTTTGGTACTTGGAGGGTGTGAGAAAGAGTGGGTGGCAAGGAAAACTGGAACTGTTTGAAGAGCAAGGTGAGGATCATGTTTATCATATCTTCCATCCCGATTCTGAGAAAGCAATGAAGATGATCAAATGCTTGCGATTGTTTCTGCACGAGTAG 990 0.4838 MASTNPKEIVAELPTYIRVFSDGTVERPRETPFVPPSIDDPLTGVSSKDIVISQSPPVSARIYLPKLAPTSDQDHPQKLPILVYFHGGGFFFESAFSELYHRYFNIFVSQTNVIAVSVEYRLAPEHPLPACYHDCWDALKWVASHSNQNNATNEDPWLISHGNFQRVFIGGDSAGGNIVHNIAMRAGTEPLPCDVKILGAIFSHPYFCSSEPIGSEAVTGHKQRLFCLVWDFVYPSAPGGIDNPMVNPFAPGAPSLDGLGCSKIIVCVASEDKIRDRGVWYLEGVRKSGWQGKLELFEEQGEDHVYHIFHPDSEKAMKMIKCLRLFLHE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00486 329 Pfam alpha/beta hydrolase fold 82 307 IPR013094 GO:0016787
Vian3g00486 329 SUPERFAMILY alpha/beta-Hydrolases 6 328 IPR029058 -
Vian3g00486 329 Gene3D alpha/beta hydrolase 9 328 IPR029058 -
Vian3g00486 329 PANTHER ARYLACETAMIDE DEACETYLASE 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00486 Vian-Chr3 4652055 4653044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00486 8 327 Carbohydrate Esterase AT3G48700 40.798 3.24e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00486 - K13258 vum:124847336 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00486 3 4652055 4653044 Vian3g00486 3 4652055 4653044 ECH