Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00466 ATGGATCCGCTGCCGGCAGCGCTCCGGTGGCGCACGACCGCCATCCCATTCCTCTTGGCGGTCCTCCTTTTATCCTCCGTCTACCCTTCGCGCGCAATCTACTGCGACGAAGATGATTGCTACGATCTGCTTGGGGTTTCTCAGAGTGCCAATGCTTCCGAAATCAAGAAAGCTTACTACAAACTCTCCTTGAAGCATCATCCAGATAAGAACCCTGATCCCGAATCGCGAAAGCTGTTTGTTAAAATCGCCAATGCTTACGAGATTTTGAAGGACGAGGCCACGCGCGAACAATATGATTATGCAATTGCACATCCAGAGGAGGTGCTTTATAATACTGCACGTTACTATCGGGCATACTATGGTCACAAGACGGATCCTCGAGCTGTGTTGGTTGGCCTTCTTATTATTCTTTCAGGTTTTCAATATCTAAATCAATCAACAAGGTATAATCAGGCTGTAGCCATGGTCAAGAAGACACCTGCATATAAAAATAAACTAAGGGCATTGGAACTTGAACGCAGTGGAGGGATTACAAACAAGAAGAAGAGTCAGAAGAATACGGTCAAGAAAGTGGAGGAAGACCTTAGCAATGAACTCGACCTGCAGATAACTGGAGCTGAAAGGGCCTCTGTGTGGAAACTTCTTGCTGTCCGCTTTGTTCTATTACCTTATACCTTAGGCAAGCTGCTACTGTGGTCTGCCTGCTGGTTTTGGAGATACAGAGTGAAGAAAAACTCTTATTCTTGGGAGGATGCTTCTTATCTGACACAACGATCCCTTGGTATTCCTCTCGATAGATGGAGACATATTGATGAAGCAACAAAGGAAGATCTTGTGCTCAAACGCTTATGGGAGAAATCGAATATGGAGAGCTATGTAGCAGAGATGCGGAAAGAATCAAAACGCAGAAGATAG 918 0.4553 MDPLPAALRWRTTAIPFLLAVLLLSSVYPSRAIYCDEDDCYDLLGVSQSANASEIKKAYYKLSLKHHPDKNPDPESRKLFVKIANAYEILKDEATREQYDYAIAHPEEVLYNTARYYRAYYGHKTDPRAVLVGLLIILSGFQYLNQSTRYNQAVAMVKKTPAYKNKLRALELERSGGITNKKKSQKNTVKKVEEDLSNELDLQITGAERASVWKLLAVRFVLLPYTLGKLLLWSACWFWRYRVKKNSYSWEDASYLTQRSLGIPLDRWRHIDEATKEDLVLKRLWEKSNMESYVAEMRKESKRRR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00466 305 PRINTS DnaJ domain signature 75 95 IPR001623 -
Vian3g00466 305 PRINTS DnaJ domain signature 41 59 IPR001623 -
Vian3g00466 305 PRINTS DnaJ domain signature 59 74 IPR001623 -
Vian3g00466 305 CDD DnaJ 39 92 IPR001623 -
Vian3g00466 305 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 25 17 304 IPR044632 GO:0006457
Vian3g00466 305 SMART dnaj_3 38 95 IPR001623 -
Vian3g00466 305 FunFam Chaperone protein dnaJ 50 26 126 - -
Vian3g00466 305 Gene3D DnaJ domain 26 126 IPR036869 -
Vian3g00466 305 Pfam DnaJ domain 39 100 IPR001623 -
Vian3g00466 305 ProSitePatterns Nt-dnaJ domain signature. 80 99 IPR018253 -
Vian3g00466 305 SUPERFAMILY Chaperone J-domain 34 106 IPR036869 -
Vian3g00466 305 ProSiteProfiles dnaJ domain profile. 39 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00466 Vian-Chr3 4442883 4445931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00466 41 111 C2H2 Transcription Factor Family AT1G74250 32.468 7.81e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00466 K19371 - gmx:100792705 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00466 3 4442883 4445931 Vian3g00466 3 4442883 4445931 ECH