Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00383 ATGGACCCCAAGGACGAATTTGAACTCACAGGGACCACTTTCTCTCAGTTACTATTCGGAGATGATCTCGATGCAACACCTGCATTGCCTCTCCCTCACCACCACTGCTCTTACGATCACCACACCCTCTCCGCTTCGCCTCTTTTCTCCTTTCACAAGCCACCCAAAATGCTATGCTTTGGAAACCATCAAACCCAACCCCACATTCCTCCCACCATCGTCACCCCTCAGAAATCTGTCATCACTTCTAGTGACTCCTCTTCTGCTTCCTCCTCCAACCACACCAACACCGCCTTCACTTCCCTACCCAAGTCCACTGTATGTCACGCTCTCTCTGTTTTCTGGCTTGTCAACCGGAAACCAGTCATGAAAAAGCGGAATGGGTTGGGACAAGAACCAGTCACCAAGGTGGGTGTTGGAGGCCAGAGACTAACTAAAAAGACCAAGGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTTGGGGAAAGAATTGCAGCGTTACAACAGCTTGTTTCTCCCTTCGGCAAGGTGACTGAGATGCAGTACAGATACAGCATCGGTGCTTCACGAGGCCATGGGATATATAAGGTTTCTTCACGACCAAGTTCAGGTCCTGTGCTCTCCTTACTTGCAAAGCTTGTCATCGTCACACCACCAACACCAGCACACAAACGTAGTACGAAACAGTCACAACTGTGGTTGCAAAACCCCGATATTGTGGATGCAATTGCGTGTTTTGAAAACCTCGATCATGAGTATGATTTATTAGAAGGTGATGGAGAAAACAACGAAGAGGAAGTGAAGAAGGACTTGAGGAGTAGGGGTCTGTGCTTGATCCCAGTGGGATGCACCGTACACGTGGCGAGTAGCAACGGTGCTGATTTTTGGTCACCTGGTGCAATAGGGAACAAAGTTTCACCATCAGGGAAGAAGTAG 951 0.4921 MDPKDEFELTGTTFSQLLFGDDLDATPALPLPHHHCSYDHHTLSASPLFSFHKPPKMLCFGNHQTQPHIPPTIVTPQKSVITSSDSSSASSSNHTNTAFTSLPKSTVCHALSVFWLVNRKPVMKKRNGLGQEPVTKVGVGGQRLTKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKVTEMQYRYSIGASRGHGIYKVSSRPSSGPVLSLLAKLVIVTPPTPAHKRSTKQSQLWLQNPDIVDAIACFENLDHEYDLLEGDGENNEEEVKKDLRSRGLCLIPVGCTVHVASSNGADFWSPGAIGNKVSPSGKK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00383 316 CDD bHLH_AtbHLH_like 160 181 IPR045239 -
Vian3g00383 316 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 56 291 - -
Vian3g00383 316 MobiDBLite consensus disorder prediction 78 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00383 Vian-Chr3 3657756 3659439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00383 134 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 31.579 3.49e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00383 - - aprc:113873132 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00383 3 3657756 3659439 Vian3g00383 3 3657756 3659439 ECH