Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00371 ATGGTGCTTGCCGAGTTGTTGGCTAGGCCAGCTTTATATGCAGACACATCTTCCCAGAATAACGCACCAACAAATTCCAATCCCACTCCTCCATTTTTCATCAGTGTTAAAACTCTCTTCAAGAACAATAATTATTATAAAAAAATGGGTAGCCTTGAAGAGGAAAGAACAACTGTAGGATGGGCAGCAAGAGACCCTTCTGGGGTTCTCTCCCCATACACCTACAATCTAAGAAACACTGGCCCTGATGATGTTTACATCAAAGTTCACTACTGTGGAATTTGCCACTCTGATCTCCACCAGATTAAAAACGATCTTGGCATGTCCAATTACCCCATGGTCCCCGGACACGAAGTGATTGGTGAGTACTGCAGCAAGAAAATTTGGTCTTACAATGATGTTTATGTGGATGGAAAGCCCACTCAGGGTGGCTTTGCAGAAACCATGATCGTCGAGCAAAAGTTTGTGGTGAAAATTCCAGAGGGTTTGGCGCCAGAGCAAGCTGCACCATTGTTGTGTGCTGGTGTGACTGTGTACAGTCCACTGTCGCATTTTGGGTTGAAAGAGAGAGGGCTGAGGGGTGGAATATTGGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATAGCAAAAGCATTCGGTCACCATGTGACTGTGATAAGTTCTTCTGACAAGAAGAAACAGGAGGCACTTGAACATCTTGGAGCTGATCAATATCTTGTTAGCTCTGATGCCACTGCTATGCAGGAAGCTGCTGATTCACTTGACTACATCATTGACACTGTGCCTGTCGGTCATCCTCTCGAGCCTTATCTCTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGGGTCATCAACACCCCTCTGCAATTTGTTAGCCCCATGGTCATGCTAGGGAGGAAATCAATAACTGGAAGTTTCATTGGAAGCATGAAGGAGACAGAGGAGATGTTGGAGTTCTGGAAAGAGAAGGGACTGAGCTCTATGATTGAAGTGGTGAACATGGATTACATTAACAAGGCTTTTGAAAGGTTGGAGAAGAACGACGTGAGATACAGGTTTGTTGTGGATGTTAAAGGGAGCAAACTTGAACAGTAA 1104 0.4529 MVLAELLARPALYADTSSQNNAPTNSNPTPPFFISVKTLFKNNNYYKKMGSLEEERTTVGWAARDPSGVLSPYTYNLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVIGEYCSKKIWSYNDVYVDGKPTQGGFAETMIVEQKFVVKIPEGLAPEQAAPLLCAGVTVYSPLSHFGLKERGLRGGILGLGGVGHMGVKIAKAFGHHVTVISSSDKKKQEALEHLGADQYLVSSDATAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLEFWKEKGLSSMIEVVNMDYINKAFERLEKNDVRYRFVVDVKGSKLEQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00371 367 Gene3D - 61 122 - -
Vian3g00371 367 Gene3D - 123 360 - -
Vian3g00371 367 Gene3D - 174 330 - -
Vian3g00371 367 SMART PKS_ER_names_mod 68 358 IPR020843 GO:0016491
Vian3g00371 367 SUPERFAMILY GroES-like 64 191 IPR011032 -
Vian3g00371 367 FunFam Cinnamyl alcohol dehydrogenase 174 330 - -
Vian3g00371 367 CDD CAD1 59 359 IPR047109 GO:0016616
Vian3g00371 367 FunFam Putative cinnamyl alcohol dehydrogenase 6 331 360 - -
Vian3g00371 367 Pfam Alcohol dehydrogenase GroES-like domain 82 122 IPR013154 -
Vian3g00371 367 Pfam Zinc-binding dehydrogenase 201 322 IPR013149 -
Vian3g00371 367 PANTHER ALDEHYDE REDUCTASE 53 122 IPR047109 GO:0016616
Vian3g00371 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 328 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00371 Vian-Chr3 3561354 3563015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00371 49 365 Monolignol Biosynthesis Gene Families AT3G19450 72.191 1.40e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00371 K00083 - gmx:100777558 573.548