Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00236 ATGGCGATGGGTGCAGTTTCCATGGGTGTGAATGGATGGGGAGACATGAAGAGTCTCACCCTCCAGGTCATCACCGGTCGATGGTTCGTCATCTTTGCCTCCTTTCTAATCATGGCTGCTGCCGGAGCCACCTACATGTTCGGTCTCTACTCCGGAGACATCAAAGAAACCCTTGGCTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTTGGTAGCAACGTTGGAGTCCTGTCTGGTCTTATCAACGAGCTCACTCCACCTTGGGTGGTCCTCGCCATCGGTGCCGTCCTAAACTTCTTTGGCTACTTCATGATATGGCTTTCCGTCACTAGGAGAATAGCCAGACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCAAACACCGGTTCCCTAGTCACCTGTGTCAAGAACTTCCCTGAAAGTCGTGGTGCTGTGTTGGGCATTCTCAAAGGCTATGTGGGTCTCAGTGGTGCAATCATCACACAATTGTACTATGCTATTTACTATGACGACACAAAGGCTTTGATTTTGCTCATAGGTTGGCTCCCAGCTGCTATTTCATTTGCTTTCCTTCGAACCATTCGCTACATGAAGCCCGTTAAGCAGCCCAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATTATTATACAGAAAAGGGCCGACTTTACTCAGAGTGAGTATGGTGTGAGCGCCGCTATTGTGGTTTTCTTGCTCTTCCTCCCACTTCTTGTCGTTTCAATAGAAGAACATAAGATCTGGCACAGTAAAAGACTTGCTTTGGTTGACCCCTCGCCCGTGAAAATAGTGACTGAGGGTGAAAAAGTGAAAAAGAATGAGACTACTAATGGGAACACTTCAGTTACAGCGATTTCCAACGACACCAAGTGGTGGGAAAATGTTTTCAGTCCTCCAGAAAGAGGTGAGGACTACACGATACTTCAAGCGCTATTCAGCGCCGACATGTTAATACTTTTCATAACTTGCATATGCGGTGTTGGGGGCACGCTCACTGCAATAGACAATTTGAATCAGATAGGATCCTCTCTTAGATACCCAAAGAAAAGTATAAGCACTTTCGTGTCCCTAGTGAGCATTTGGAACTATATGGGAAGGGTTTTCTCTGGATTTGTTTCTGAACATTTCCTCAACAAGTACAAGTTTCCCCGTCCTCTCATGCTTTCTTTAACTCTGCTCTTATCATGTGTTGGTCACCTTCTGATAGCATTTGATGTGCCAAATGGACTTTATGCTGCTTCGGTGATCATCGGCTTTTGTTTTGGCGCTCAGTGGCCTTTACTTTTTGCCATTATATCAGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAACTTTGGAAGCGTAGCAAGTCCATTAGGGTTATATGTGCTTAATGTGAAAATGACTGGGTATTTGTATGACAAAGAAGCAAAGAAGCAACTGGCAGCTTTGGGGCTTGAGAGAAAGGAAGGCGAGCAATTGAACTGTATCGGGGTGGACTGCTTCAAGTTATCATTCATTATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTTTGGTGGCTAGAACAAGAAAGTTTTACAGTGGTGACATATACAAGAGATTCCAGGATGCAGCCACGGTGTCAGAAACTGAAATGGCAGGGTTAGATAACACCAGCAAACCAAAGAAAGATGCCAAAAATATGGTGCCAACTCAGAACTATGACTAA 1800 0.4461 MAMGAVSMGVNGWGDMKSLTLQVITGRWFVIFASFLIMAAAGATYMFGLYSGDIKETLGYDQTTLNLLSFFKDFGSNVGVLSGLINELTPPWVVLAIGAVLNFFGYFMIWLSVTRRIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYYAIYYDDTKALILLIGWLPAAISFAFLRTIRYMKPVKQPNELKVFYNFLYISLGLAGFLLVMIIIQKRADFTQSEYGVSAAIVVFLLFLPLLVVSIEEHKIWHSKRLALVDPSPVKIVTEGEKVKKNETTNGNTSVTAISNDTKWWENVFSPPERGEDYTILQALFSADMLILFITCICGVGGTLTAIDNLNQIGSSLRYPKKSISTFVSLVSIWNYMGRVFSGFVSEHFLNKYKFPRPLMLSLTLLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKMTGYLYDKEAKKQLAALGLERKEGEQLNCIGVDCFKLSFIIITAATFFGAIVSLILVARTRKFYSGDIYKRFQDAATVSETEMAGLDNTSKPKKDAKNMVPTQNYD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00236 599 CDD MFS_Mch1p_like 26 543 - -
Vian3g00236 599 FunFam Nodulin family protein 338 559 - -
Vian3g00236 599 Gene3D MFS general substrate transporter like domains 327 557 IPR036259 -
Vian3g00236 599 Pfam Nodulin-like 27 271 IPR010658 -
Vian3g00236 599 SUPERFAMILY MFS general substrate transporter 26 555 IPR036259 -
Vian3g00236 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 561 - -
Vian3g00236 599 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00236 Vian-Chr3 2079499 2081298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00236 14 567 Nodulin-like Gene Family AT2G39210 72.939 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00236 - - pvu:PHAVU_007G024800g 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00236 3 2079499 2081298 Vian3g00236 3 2079499 2081298 ECH