Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00235 ATGGCGATAGGTGCAGCTTCCATGGGTGTGAATGGATGGGGAGACATGAAGAGTCTCACCGTCCAGGTCATCACCGGTCGATGGTTCGTCGTCTTTGCCTCCTTTCTAATCATGGCTGCTGCCGGAGCCACCTACATGTTCGGTCTCTACTCCGGAGACATCAAAACCACCCTTGGCTACGACCAAACCACTCTCAATCTCCTAAGTTTCTTCAAGGACATGGGCACTAACGTTGGAGTCCTCTCTGGTCTTATCAACGAGCTCACTCCACCTTGGGTGGTGCTAGCCATCGGTGCTCTGCTAAACTTTTTCGGTTACTTCATGATTTGGCTCTCAGTCACCCAGAAAATAGCCAGACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCCAACACCGGTTCCCTAGTCACCTGTGTCAAGAACTTCCCTGAAAGTCGTGGTGTTGTGTTAGGCATTCTCAAAGGCTACGTGGGTCTCAGTGGAGCAATCATCACACAATTGTACTCTGCTATTTACTATGACGACACAAGGGCTTTGATTTTGCTCATAGGTTGGCTTCCAGCTGCTATTTCCTTTGCTTCCCTTCGAACCATTCGCTACATGAAGCCAGTTAGGCAGCCCAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATCTCTCTTGGCCTTGCCGGGTTTCTTTTGGTCATGATTATTATACAGAAAAGGGTTGACTTTACTCAGAGTGAGTATGGTGTGAGCGCCGCTATTGTGATCTTCTTGCTCTTCCTCCCGCTTGCTGTTGTTTCCATCGAAGAATATAAGATCTGGCACAGTAAAAGGCTTGCTTTGGTTGATCCTTCCCCGGTGAAAGTAGTAACCGAGAGTGAAAGGATTAAACCGAATGAGGCTACTAACGGTAGCAATTCAGTGTCAGCAGTTTCCAACGACACCAAGTGGTGGGAAAATGTGTTTAGTCCACCACCAAGAGGTGAGGACTATACGATACTTCAAGCACTATTCAGCATCGACATGTTCCTCCTGTTCATATGTAGCATCTGTGGTATTGGGGGCACGTTGACTGCAATAGATAATCTGGGTCAGATAGGAAAATCGCTTCGATACCCGAAGAAAAGCATAAGCACTTTCGTGTCCCTGGTAAGCATTTGGAATTACCTAGGACGTGTTTTCTCTGGATTTGTTTCTGAACATTTTCTACACAAGTACAAGTTCCCTCGTCCTCTCATGCTTACTTTAACTATGCTGCTGTCATGTGTTGGCCACCTTCTGATAGCATTTGATGTGTCAAATGGCCTTTATGCGGCTTCGGTAATCATAGGGTTTTGTTTTGGAGCTCAGTGGCCGTTACTTTTTGCCATTATATCAGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAATTTTGGAAGTGCAGCGAGTCCACTGGGTCTATATGTTCTTAATGTGGTGATGACTGGGCATTTGTACGACAAAGAAGCAAAGAAGCAACTGGCAGCGTTGGGGCTTGAAAGAAAGAAAGGGCAAGAATTGAATTGTATAGGGCTTCATTGCTTCAAGTTATCCTTCATCATTATCACAGCTGCAACTTTCTTCGGTGCCATTGTTTCACTGATTTTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATTCAGGGATGCAGCCACGGTGTCAGAAACTGAAATGGCGAGCGTGAAGAACGCAAACGGTGCAGAGAAAGATGAGAAACATGTGGTGCCAACTCATCGTCTTGATCAGAACAGCGACTAA 1812 0.4564 MAIGAASMGVNGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSGDIKTTLGYDQTTLNLLSFFKDMGTNVGVLSGLINELTPPWVVLAIGALLNFFGYFMIWLSVTQKIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTRALILLIGWLPAAISFASLRTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMIIIQKRVDFTQSEYGVSAAIVIFLLFLPLAVVSIEEYKIWHSKRLALVDPSPVKVVTESERIKPNEATNGSNSVSAVSNDTKWWENVFSPPPRGEDYTILQALFSIDMFLLFICSICGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLHKYKFPRPLMLTLTMLLSCVGHLLIAFDVSNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSAASPLGLYVLNVVMTGHLYDKEAKKQLAALGLERKKGQELNCIGLHCFKLSFIIITAATFFGAIVSLILVARTRKFYKGDIYKRFRDAATVSETEMASVKNANGAEKDEKHVVPTHRLDQNSD 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00235 603 MobiDBLite consensus disorder prediction 582 603 - -
Vian3g00235 603 FunFam Nodulin family protein 338 559 - -
Vian3g00235 603 CDD MFS_Mch1p_like 26 543 - -
Vian3g00235 603 Pfam Nodulin-like 27 271 IPR010658 -
Vian3g00235 603 SUPERFAMILY MFS general substrate transporter 27 556 IPR036259 -
Vian3g00235 603 MobiDBLite consensus disorder prediction 580 603 - -
Vian3g00235 603 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 562 - -
Vian3g00235 603 Gene3D MFS general substrate transporter like domains 340 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00235 Vian-Chr3 2068084 2069895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00235 5 567 Nodulin-like Gene Family AT2G39210 71.781 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00235 - - pvu:PHAVU_007G024800g 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00235 3 2068084 2069895 Vian3g00235 3 2068084 2069895 ECH
Vian2g02392 2 44382609 44384354 Vian3g00235 3 2068084 2069895 ECH
Vian3g02057 3 26372189 26373886 Vian3g00235 3 2068084 2069895 ECH