Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00234 ATGGCAGTTGCAGTGGGAGATATGGTTAACACCAATGGCCTCCTCGTCCAAGTCATCACCGGACGGTGGTTCGTGGTCTTCGCCTCCTTCCTTATCATGGCCGCCGCCGGCGCTACCTACATGTTCAGTCTATACTCCGGCGACATCAAATCCGCCCTGGCCTACGACCAAACGACCCTCAACCTCCTCAGTTTCTTCAAAGACCTGGGGGGCAATGTCGGCGTGCTCTCCGGCCTCATAAACGAGATTACTCCCCCGTGGGTGGTCCTGGCCATGGGTTCCATACTCAACTTCTTCGGCTACTTCATGATATGGCTGGCGGTCACAAAAAGAATACCCAGACCGCAAGTGTGGCAGATGTGCCTCTACATCTGCATCGGTGCCAACTCTCAGTCCTTTGCCAACACCGGTTCACTCGTGACCTGCGTCAAGAACTTCCCCGAGAGCCGTGGTGTTGTGTTAGGCATCCTCAAAGGCTACGTGGGTCTGAGTGGAGCCATAATCACGCAGCTCTACTACGCCTTCTACTTCGACGACTCCAGGTCCTTGATTTTGCTCATAGCCTGGCTCCCAGCTGCTATCTCCTTCGCTTTCCTTCGTACCATTCGCTACATGAAACCCGTTCGACAACCCAACGAGCTCAGTGTCTTCTACAAGTTCTTGTACATCTCGCTGGCTCTCGCTGGCTTCCTCTTGCTCATGATCATAGTTCAGAAAAAATTCCCCTTCTCGCAAGGTGAGTATGGCGCAAGTGCCGGGGTTGTGCTTCTCCTGCTCTTCCTCCCACTTGCTGTTGTTTTTGTTGAACAACGTAAAATCAGGGAGACTCAGAAGCTAGCATTCATTGACCCATCCCCGGTGAAGATATCAGCTGAAAGAGAGCTACCGAAGTCGGCAAACGGTGACTCTAACCCGGTTTTGGGTCCGATTTCAAAGACCGAAGAGACCAGATGGTGGCAAAAAGTCTTTAGTCCACCGGCTAGAGGTGAGGACTATACTATACTTCAAGCACTATTCAGCCTGGACATGATACTTCTATTCGTATCCGGCACGTGCGGTGTTGGGGGAACTTTGACCGCAATTGATAATCTTGGTCAGATTGGGAGCTCGCTAGGGTACTCCAAGGCTAGCATAAGCACGTTTGTGTCGTTGGTTAGCATTTGGAATTATATGGGTCGGGTTTTTTCTGGGTTTGTCTCGGAACATTTTCTGCAACAGTACAAGTTCCCTCGACCACTGATGCTCACGCTGACCCTGCTCTTATCCTGCGTGGGTCACCTTCTGATAGCCTTCGACGTGCCGAACGGACTCTACATTTCATCAGTGATCATCGGGTTCTGCTTTGGCGCGCAATGGCCTCTGCTGTTCGCCATAATTTCCGAGCTCTTCGGGCTCAAGTACTATTCAACGTTGTACAACTTTGGCGGTGCAGCGAGCCCAATTGGGCTCTACATTCTGAACGTGAGGGTGACCGGGCACCTGTATGACAAGGAGGGTCTGAGGCAACTTGCAGCGGCGGGGAAACCAAGAATTAGTGGCCAGGAATTGACTTGTACAGGGGGCAGTTGTTTCAAGTTGTCTTTCATCATTATCACTGCAGCCACCGTTTTCGGTGCCATAATTTCACTCATCTTGGTTGCTAGGACTATTCCATTCTACAAAGGTGATATATACAAGAGGTACCGTGACCAAGCTGAGGAAAACACAACAACCGCCACGACCACCGAGATGAAGGTGGTCGAAAGCGGCGGTGAGAAAAGACAAGAAGCCGTGGTGGAGTAA 1782 0.5135 MAVAVGDMVNTNGLLVQVITGRWFVVFASFLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAMGSILNFFGYFMIWLAVTKRIPRPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYYAFYFDDSRSLILLIAWLPAAISFAFLRTIRYMKPVRQPNELSVFYKFLYISLALAGFLLLMIIVQKKFPFSQGEYGASAGVVLLLLFLPLAVVFVEQRKIRETQKLAFIDPSPVKISAERELPKSANGDSNPVLGPISKTEETRWWQKVFSPPARGEDYTILQALFSLDMILLFVSGTCGVGGTLTAIDNLGQIGSSLGYSKASISTFVSLVSIWNYMGRVFSGFVSEHFLQQYKFPRPLMLTLTLLLSCVGHLLIAFDVPNGLYISSVIIGFCFGAQWPLLFAIISELFGLKYYSTLYNFGGAASPIGLYILNVRVTGHLYDKEGLRQLAAAGKPRISGQELTCTGGSCFKLSFIIITAATVFGAIISLILVARTIPFYKGDIYKRYRDQAEENTTTATTTEMKVVESGGEKRQEAVVE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00234 593 Pfam Major Facilitator Superfamily 366 546 IPR011701 GO:0022857|GO:0055085
Vian3g00234 593 Gene3D MFS general substrate transporter like domains 337 551 IPR036259 -
Vian3g00234 593 Pfam Nodulin-like 22 267 IPR010658 -
Vian3g00234 593 CDD MFS_Mch1p_like 21 539 - -
Vian3g00234 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 558 - -
Vian3g00234 593 SUPERFAMILY MFS general substrate transporter 22 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00234 Vian-Chr3 2062405 2064186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00234 14 564 Nodulin-like Gene Family AT2G39210 68.231 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00234 - - gmx:100808975 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00234 3 2062405 2064186 Vian3g00234 3 2062405 2064186 ECH