Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00151 ATGTCAACCTCTGACGGCACCACTAACGGCGTCTCTAACGCCTCAATCATTGACCCGCAACGCCAGCAGCCCCAGGCGTTGGCCGTCAAGAAGCCACCGTCCAAGGACCGCCACAGCAAGGTCGACGGACGCGGCCGCCGCATACGAATGCCCATCATCTGCGCCGCCAGAGTCTTCCAGCTAACGCGGGAGCTGGGTCACAAGTCAGACGGCCAGACCATCGAGTGGCTCCTGCGCCAGGCCGAGCCTTCCATCATCGCCGCCACCGGTACAGGCACCACGCCCGCCAGCTTCTCCTCCGTCTCCCTCTCCGTACGCGCCGCCAACTCCGCGTCTCTCTCCTCGCCTTCCTCCGCCTCCGACCACAAGCCGCAGCTCCTCGCTCCCACGCCCTTCATCCTCGGCAAGCGCATACGCACCGACGATGACACTTCCAAGGACGACGCTGTTTCCGTGGGCCCCTCCCTCGTGGGCCCCTCTACCCCGCCCGGACTGTGGGCCCTCCCTGCTCGCCCCGATTTCGGACAAATTTGGAGCTTCGCCGCCGCCCCAGAAATGGTCGTGCAGCCCGCCGCCGTGTCGGTGTCGCAACAGCACGCCTCGCTCTTTGCTCATCACCAACGTCAGCAGCAGCAGGCCATCGGAGAAGCGTCGGCGGCTAGGGTGGGGAATTACCTTCCGGGACATCTGAATTTACTGGCTTCGTTGTCCGGTGGACCTGGGAATTCTGGTCGGAGGGATGGCGAGCATCGTTGA 756 0.6455 MSTSDGTTNGVSNASIIDPQRQQPQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSLSVRAANSASLSSPSSASDHKPQLLAPTPFILGKRIRTDDDTSKDDAVSVGPSLVGPSTPPGLWALPARPDFGQIWSFAAAPEMVVQPAAVSVSQQHASLFAHHQRQQQQAIGEASAARVGNYLPGHLNLLASLSGGPGNSGRRDGEHR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00151 251 Pfam TCP family transcription factor 34 125 IPR017887 -
Vian3g00151 251 MobiDBLite consensus disorder prediction 1 47 - -
Vian3g00151 251 MobiDBLite consensus disorder prediction 31 47 - -
Vian3g00151 251 ProSiteProfiles TCP domain profile. 34 88 IPR017887 -
Vian3g00151 251 MobiDBLite consensus disorder prediction 1 22 - -
Vian3g00151 251 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 223 IPR005333 GO:0003700
Vian3g00151 251 MobiDBLite consensus disorder prediction 131 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00151 Vian-Chr3 1127250 1128005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00151 12 251 TCP Transcription Factor Family AT5G23280 65.714 1.89e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vian3g00151 TCP 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00151 K16221 - gmx:100799005 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00151 3 1127250 1128005 Vian3g00151 3 1127250 1128005 ECH