Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00147 ATGTCTCAGACATCCAGTGTCCTGCCTGCCTTCCACTCCATCAAGCCATTGCCCTCTGAGTTCAAGTTTGCCAACAATCCAAACCCTCTGCTTGTGGAAAAACATGGAGATGTTAAATTTAGACGCACCAATCCGATTGGACCAAATGGTTTTGAGAATGGTGCAGTAGTAGGGGAGGTTTCTAAGGAAGTTCGAGGCCGAGCTGGTGGCATGGATCTTTTTGATGAGGATTCACCGTATGGTGGAAAAGGTAGATCATTAAAAGACCGACCATCTAATGCAGATGAAGACTCAGCATCCGTTACTTTGCCTCTGCCATCAACTTTGACATCCTCTAGGGAAAACAGGTGGAATGATACAAATTCTTATGGTTCAAAAAAGAGCAATTGTTATTCAATTAGCGGCATAGATGATGCTGAAGAATTTCGCATAGTCAAGGAAGCTCTGGATATTGTCCACATTAGCAAGGGAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGGTCGATAATGAAAATCATGTTGAAGCTGTTGAGGATGAGGGTCTGTTCACCGTTGCCAAGTTGATTGGATGTGAAATTGAAGACCTGAAATTGACTTTTTCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAGAAGTTGACGCTCTCTCAGGCTATTGATGCGAGAGATGCTTTGGCGAAGTCAATATATGCATGTTTGTTTGATTGGTTGGTTGAGCAAATAAATAAATCCCTTGCAGTTGGCAAAAGACGAACTGGCAGATCAATCAGCATTCTTGATATTTATGGCTTTGAGTCATTCAATAGGAATAGTTTTGAGCAGTTTTGCATAAATTATGCAAACGAAAGATTACAGCAACATTTCAATCGTCATTTGTTCAAGCTGGAACAGGAGGAATATATCCAAGATGGCATTGATTGGGCTAAAGTGGAATTTGAAGACAACCAAGATTGCCTTAATCTGTTTGAAAAGAAACCATTGGGACTACTATCCCTGTTAGATGAAGAGTCAACTTTCCCTAATGGCACAGATTTAACGTTTGCTAATAAGCTTAAGCAGCATTTGAATTCCAATTCTTGCTTCAAAGGAGAACGTGAAAAAGCCTTTACTGTGCGTCATTATGCAGGGGAGGTCACTTATGATACATCTGGATTCCTGGAAAAGAACAGGGACCTATTGCACTTAGATTCTATCCAACTTCTATCTTCAAGCAAATGCCATCTTCCTAAGTTATTTGCATCCCATATGCTTACTCAGTCTGAGAAGCCTGTTGTAGGTCCCTTACATAAGTCAGGGGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTGTTCCAATTGATGCAACGTCTAGAGAGTACTACACCACATTTTATACGTTGCATTAAGCCCAATAACCTCCAATCACCTGGATCATATGAGCAAAGCCTTGTACTTCAGCAGTTGAGATGTTGTGGAGTTCTGGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACTAGAGTATCTCACCAAAAGTTTGCCAGGAGATATGGTTTTCTTCTCCTTGAAAATGTTGCCTCTCAGGATCCGCTCAGTGTCTCAGTTGCTATTCTTCATCAGTTCAACATTTTGCCTGAGATGTTTCAAGTTGGCTACACAAAGCTATTCTTCCGAACAGGGCAGATTGGAGTGCTTGAGGATACCAGAAATCGTACTCTGCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTCACCGAGCTCGTTGTTACCGCAAGGAACTTTGGAGAGGAATTACCATTCTCCAATCATTTATTAGAGGAGAGAAAAGCAGAAAGGAATATGCAAGTTTGCTTCACAGACATAAGGCTGCTGTTATTATACAGAAGCGGATGAAAACAGTATTTGCAAGGAACAGAATGAAAAGTATTAACGAAGCTGCAGTTGTCATACAATCTTTTATCCGTGGTTGGTTAGTCAGAAGATGCTCTGGAAACATAGTATTATCAAAATCTGGAGTCACGAAGACTAATGAGTCAAATGAGGTTCTTGTGAAGTCGTCTTTCCTCGCTGAACTTCAGCGCCGGGTACTTAAGGCAGAAGCTGCCCTGAGAGAGAAGGAAGAGGAGAATGACATTCTTCACCAACGCCTTCAACAGTATGAGAACAGATGGTCCGAATACGAGTTAAAGATGAAGTCCATGGAACAAGTATGGCAGAAGCAAATGAGATCCCTGCAATCTAGCCTCTCTATTGCAAAGAAGAGCCTGGCTCTGGATGAATCCGAAAGAAATTCAGATGCTTCTGTTAACGCAAGTGACGAGAGAGATTTCAGCTGGGATGTAGGAACCAATCACCGTCGTCAAGAAAGCAACGGGGCAAGATCAATGAGTGCTGGTTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTAGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTGAACCCAGATAGAGAACTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGTTCAAGACTTCGTGAAACAAAGGTCATTTTACATAAACTTGGAAGTGAAGATGGATCAATTGAGAAAGTGAAGAAAAGTTGGTGGGGAAGAAGGAATAGTACCAGAATAAGTTGA 2730 0.4128 MSQTSSVLPAFHSIKPLPSEFKFANNPNPLLVEKHGDVKFRRTNPIGPNGFENGAVVGEVSKEVRGRAGGMDLFDEDSPYGGKGRSLKDRPSNADEDSASVTLPLPSTLTSSRENRWNDTNSYGSKKSNCYSISGIDDAEEFRIVKEALDIVHISKGDQENVFAMLAAVLWLGNISFTVVDNENHVEAVEDEGLFTVAKLIGCEIEDLKLTFSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVRHYAGEVTYDTSGFLEKNRDLLHLDSIQLLSSSKCHLPKLFASHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQSLVLQQLRCCGVLEVVRISRSGFPTRVSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMFQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYRKELWRGITILQSFIRGEKSRKEYASLLHRHKAAVIIQKRMKTVFARNRMKSINEAAVVIQSFIRGWLVRRCSGNIVLSKSGVTKTNESNEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEQVWQKQMRSLQSSLSIAKKSLALDESERNSDASVNASDERDFSWDVGTNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGSRLRETKVILHKLGSEDGSIEKVKKSWWGRRNSTRIS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00147 909 ProSiteProfiles IQ motif profile. 658 687 IPR000048 GO:0005515
Vian3g00147 909 ProSiteProfiles IQ motif profile. 611 638 IPR000048 GO:0005515
Vian3g00147 909 MobiDBLite consensus disorder prediction 69 95 - -
Vian3g00147 909 Gene3D Myosin VI head, motor domain, U50 subdomain 155 452 - -
Vian3g00147 909 Pfam IQ calmodulin-binding motif 612 629 IPR000048 GO:0005515
Vian3g00147 909 Pfam IQ calmodulin-binding motif 660 676 IPR000048 GO:0005515
Vian3g00147 909 Pfam IQ calmodulin-binding motif 590 605 IPR000048 GO:0005515
Vian3g00147 909 Gene3D Kinesin motor domain 265 513 IPR036961 -
Vian3g00147 909 Gene3D - 518 582 - -
Vian3g00147 909 ProSiteProfiles Myosin motor domain profile. 1 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g00147 909 Gene3D - 125 153 - -
Vian3g00147 909 MobiDBLite consensus disorder prediction 96 121 - -
Vian3g00147 909 Pfam Myosin head (motor domain) 120 572 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g00147 909 ProSiteProfiles IQ motif profile. 588 614 IPR000048 GO:0005515
Vian3g00147 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 632 IPR027417 -
Vian3g00147 909 MobiDBLite consensus disorder prediction 69 121 - -
Vian3g00147 909 PANTHER MYOSIN 126 901 - -
Vian3g00147 909 FunFam Unconventional myosin-XIX 282 474 - -
Vian3g00147 909 Gene3D - 637 679 - -
Vian3g00147 909 Gene3D - 588 636 - -
Vian3g00147 909 PRINTS Myosin heavy chain signature 270 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g00147 909 PRINTS Myosin heavy chain signature 323 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g00147 909 SMART MYSc_2a 43 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian3g00147 909 SMART iq_5 585 607 IPR000048 GO:0005515
Vian3g00147 909 SMART iq_5 608 630 IPR000048 GO:0005515
Vian3g00147 909 SMART iq_5 657 679 IPR000048 GO:0005515
Vian3g00147 909 SMART iq_5 634 656 IPR000048 GO:0005515
Vian3g00147 909 Gene3D - 280 474 - -
Vian3g00147 909 Coils Coil 704 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00147 Vian-Chr3 1083147 1093082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00147 99 907 Myosins gene family AT1G50360 77.682 0.0 1286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00147 - K10357 gmx:100782618 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00147 3 1083147 1093082 Vian3g00147 3 1083147 1093082 ECH