Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00125 ATGGAAGAGATGCCGGGTTCAGCAACGGCAATAAATTCTTCCAATATTGGATTTCAGCTATTGAAGAAACAAGGTTGGAAAGAAGGGACTGGTCTTGGAGTATCTGAGCAGGGTAGATTAGAACCCGTGGAAACTTATGTAAAAAATAATAAACGAGGTTTGGGAGCAGATAAAGTGAAGAAAAAGGCCGTGAAAGTGAAACCGGATCATAGCGATTCCTCTAAAGAGACCAGTCAACAGGATCATTTACCTCAAAAGAAAAGCAAAACTTTGTCTAAACGGATGAGAAAGATGCAGGAGTTGGAGAAGAAAATGCAAGAGAAGGAGTTTGAACGAGCTTTTTTCAGAGAGTTCTGGCCAGAAAATGTATAA 372 0.4005 MEEMPGSATAINSSNIGFQLLKKQGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKVKKKAVKVKPDHSDSSKETSQQDHLPQKKSKTLSKRMRKMQELEKKMQEKEFERAFFREFWPENV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00125 123 Coils Coil 88 111 - -
Vian3g00125 123 MobiDBLite consensus disorder prediction 50 100 - -
Vian3g00125 123 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Vian3g00125 123 PANTHER BAT4 PROTEIN-RELATED 3 123 IPR039146 -
Vian3g00125 123 SMART G-patch_5 11 57 IPR000467 GO:0003676
Vian3g00125 123 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Vian3g00125 123 MobiDBLite consensus disorder prediction 51 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00125 Vian-Chr3 931507 933002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00125 11 55 C2H2 Transcription Factor Family AT5G26610 53.333 3.12e-10 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00125 3 931507 933002 Vian3g00125 3 931507 933002 ECH