Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00121 ATGGTGAACGTGGTGGAATTGCAGAAACAGCTGCAGAGGTGGCAGCAGAGTGGCAACAATGTCAATGTCGACGCCAACGGAGAACTCATGTATGTCAAAGTCATGACTGATGAACAGTTGGAAACTCTGAGGAAACAGATTGCTGTTTATGCCACCATTTGTGACCAACTTATTGAGATGCACAGAACACTCTCAGCTCAGCAGGATCTTGCAGGGGTTAGATTGGGAAACCTGTACTGTGATCCATTGTTGACATCTGGTGGACACAAAATAACATCAAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAACGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAAGAGATAACTGCTGAGCTGGGCCAGCATGGTCAAATTTCTGAAACAAATGTGTACAACTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTGGCAACACTGAATCAGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGAGGAGTTTCTGTCTCAACATAACATAACAACTTCTGGAGGATCCGAAAAGCTGTGCTTTCAGAACCCTCAGGTGTACTCTGATTTGCAGTACTTGAACACTGATTCCAACAAGCCGTATTCCATGTTCCCATCAGATGGCAGTTTGAAATCCACAAGAAATTTGACTCATGTGTCTGTTTTTAACCAGGTGCTGTCAAATTCAAGGAGTGAGTATGCAGGTGGAAAAATGGAAGTTGGTGGAACAGTGAGCTACAATTTGTTCCACCAAACAGGAGATTGCAATCTGGGGTCTGATTTTTAG 846 0.4338 MVNVVELQKQLQRWQQSGNNVNVDANGELMYVKVMTDEQLETLRKQIAVYATICDQLIEMHRTLSAQQDLAGVRLGNLYCDPLLTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPGNTESEVDTEVDSKDKKTKPEEFLSQHNITTSGGSEKLCFQNPQVYSDLQYLNTDSNKPYSMFPSDGSLKSTRNLTHVSVFNQVLSNSRSEYAGGKMEVGGTVSYNLFHQTGDCNLGSDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00121 281 PANTHER WUSCHEL-RELATED HOMEOBOX 13 15 268 IPR044559 GO:0003700
Vian3g00121 281 MobiDBLite consensus disorder prediction 153 180 - -
Vian3g00121 281 SMART HOX_1 92 159 IPR001356 GO:0003677
Vian3g00121 281 Pfam Homeodomain 94 154 IPR001356 GO:0003677
Vian3g00121 281 ProSiteProfiles 'Homeobox' domain profile. 90 155 IPR001356 GO:0003677
Vian3g00121 281 CDD homeodomain 94 155 IPR001356 GO:0003677
Vian3g00121 281 SUPERFAMILY Homeodomain-like 92 156 IPR009057 -
Vian3g00121 281 Gene3D - 96 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00121 Vian-Chr3 894447 896109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00121 30 277 Wox Gene Family AT4G35550 51.880 1.13e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian3g00121 Homeodomain 8.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00121 - - pvu:PHAVU_007G011600g 511.531