Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00103 ATGGCTCTTGAGGTTGCTGTCAAGGCTGCTGCTGGTGCTCCAGATGTTCTCGGAGACTGTCCATTTTGCCAAAGGGTCCTTTTAACTTTAGAGGAGAAGAAGATTCCGTACAAGCTCAACCTAATTGATCTCAGTAACAAACCCGAATGGTTTTTGGGTGTGAATCCTGAAGGAAAGGTGCCAGTGGCTCTTTTTGATGGAAAATGGGTGCCTGATTCTGATGTAATTGTGGGGATTCTCCAAGAAAAGTACCCAGAAATCTCTCTCGTTACTCCTCCTGAATTTGCCACCGTGGGATCAAAGATATTTGGGTCTTTTGTGAGTTTTCTTAAGAGCAAGGATCCGAATGATGGAACAGAGCAAGCGTTGCTGGCTGAATTGAGTGCTCTGGATGAACATCTTAAGGCCCATGGTCCATATATTGCTGGGGAGAAAGTCACTGCTGTTGACCTGAGTTTGGCACCAAAACTGTACCATCTTGTGGTCGTACTTGGCCACTTCAAGAAATGGAGTGTTCCAGAAAGTTTGTCACATGTCCACATCTACACTAAGCTGCTCTTCTCCCGTGAGTCATTTGAGAAAACCAAGCCTCCAAAGGAAGAGTTTGTTATTGCTGGATGGGCACCAAAAGTGAATGCTTGA 642 0.4533 MALEVAVKAAAGAPDVLGDCPFCQRVLLTLEEKKIPYKLNLIDLSNKPEWFLGVNPEGKVPVALFDGKWVPDSDVIVGILQEKYPEISLVTPPEFATVGSKIFGSFVSFLKSKDPNDGTEQALLAELSALDEHLKAHGPYIAGEKVTAVDLSLAPKLYHLVVVLGHFKKWSVPESLSHVHIYTKLLFSRESFEKTKPPKEEFVIAGWAPKVNA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00103 213 Gene3D Glutaredoxin 1 89 - -
Vian3g00103 213 CDD GST_C_DHAR 89 210 - -
Vian3g00103 213 CDD GST_N_family 20 77 - -
Vian3g00103 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Vian3g00103 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 213 - -
Vian3g00103 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 210 IPR044627 GO:0033355|GO:0045174|GO:0098869
Vian3g00103 213 Gene3D - 90 213 - -
Vian3g00103 213 Pfam Glutathione S-transferase, N-terminal domain 19 86 IPR004045 -
Vian3g00103 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Vian3g00103 213 SFLD Glutathione Transferase (cytosolic) 19 184 IPR040079 -
Vian3g00103 213 SFLD Main (cytGST) 19 184 - -
Vian3g00103 213 Pfam Glutathione S-transferase, C-terminal domain 120 178 - -
Vian3g00103 213 SUPERFAMILY Thioredoxin-like 19 86 IPR036249 -
Vian3g00103 213 SUPERFAMILY GST C-terminal domain-like 95 203 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00103 Vian-Chr3 779505 782436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00103 1 213 Glutathione S-transferase Gene Family AT1G75270 72.897 5.28e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00103 K21888 - gmx:100306061 385.956