Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00084 ATGGCCACTACAAATTCTCTCAGTGTGTCTTTTCCTGGCTTCAAACTAAAACTTTGTCTGACTCTGATTGCATGTGTAATTGGGGTTACTTCAGCTCAGTTATCTGCTAAATTCTATGAACAAAGTTGCCCTGGTGCTCTTGCCACCATAAGGAAAGGAGTGAAACAAGCTGTGCACAATGAGTTTCGCATGGGGGCATCCTTGCTCCGACTCCATTTCCATGACTGCTTCGGATGTGATGCATCTGTGTTGTTAGACGACACGGATACTTTCACTGGGGAGAAGAATTCATTTCCAAATGCTAACTCTCTTAGAGGTTTTGATGTGATTGATAACATAAAATCAGAGTTGGAGAACATGTGCCAAGGTGTTGTCTCTTGTGCAGACATCTTAGCCGTTGCTGCGAGAGACGCTGTTTTTGAACTTGGTGGACCAAGATGGGAAGTACCATTAGGCAGAAGAGATTCAACCACAGCAAGTTTAGCCGAATCTAATTCAGACTTACCAGCTCCTTTTTTCGATCTCGATGGCCTCACCAGTGCTTTCGCCAAGAAAAATTTCACTGTCCAAGAACTAGTTACTTTATCAGGTGGTCACTCAATAGGACTGGTGAGGTGTCGTTTTTTCAGAAAGAGGATTTACAACGAGAGCAACATCGACCAGACATTTGCAGAGGAAAAGCAACAAGAGTGTCCCTTCGAAGGTGGTGACGACAACTTAAGTGCTTTCGATTCGACCACTCCGTTCAAATTTGACAATGCGTTCTACAAGAACTTGTTGCAGCAAAAGGGTCTGGTCCACTCCGATCAACAGCTCTTCAACGGCGTCAATGGAACTAATAGCCCCACAAAGGATCAAGTAGTTAGTTATGCGAGAAACATGGCAAAATTCAAGAAGGATTTCGCAGCTGCAATGTTGAAGATGAGCATGATGACCCCACTTACTGGTTCAGACGGTGAGATCAGGAAAAAGTGCAGCCGAGTGAATCCTCCTTCAACCTGA 1002 0.4441 MATTNSLSVSFPGFKLKLCLTLIACVIGVTSAQLSAKFYEQSCPGALATIRKGVKQAVHNEFRMGASLLRLHFHDCFGCDASVLLDDTDTFTGEKNSFPNANSLRGFDVIDNIKSELENMCQGVVSCADILAVAARDAVFELGGPRWEVPLGRRDSTTASLAESNSDLPAPFFDLDGLTSAFAKKNFTVQELVTLSGGHSIGLVRCRFFRKRIYNESNIDQTFAEEKQQECPFEGGDDNLSAFDSTTPFKFDNAFYKNLLQQKGLVHSDQQLFNGVNGTNSPTKDQVVSYARNMAKFKKDFAAAMLKMSMMTPLTGSDGEIRKKCSRVNPPST 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00084 333 FunFam Peroxidase 37 178 - -
Vian3g00084 333 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Vian3g00084 333 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 FunFam Peroxidase 169 308 - -
Vian3g00084 333 CDD secretory_peroxidase 33 328 IPR033905 GO:0004601|GO:0042744
Vian3g00084 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Vian3g00084 333 Gene3D - 37 326 - -
Vian3g00084 333 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PANTHER PEROXIDASE 72-RELATED 28 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 ProSiteProfiles Plant heme peroxidase family profile. 33 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian3g00084 333 Gene3D Peroxidase, domain 2 169 308 - -
Vian3g00084 333 Pfam Peroxidase 51 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00084 Vian-Chr3 655018 656820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00084 29 329 Peroxidase AT5G05340 55.410 1.83e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00084 K00430 - gmx:100802244 497.664