Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00030 ATGGAATACGAGGTTGTGAGTATGTTGGCGTTGGGCATGTTGGTGTTAGGCATGTTGGTGAGGATGAAGGTTATGGAAGGAAGGCAGCAGCTTCCACCAGGACCAAGATGTTGGCCAGTGGTTGGTAACATGTTCCAACTAGGGTGGTCACCACACGAGTCCTTTGCAAAACTTGCTCATAAACATGGTCCAGTCATGAGGCTTTGGCTAGGGTCGATGTGCACAGTGGTTATCTCGTCAAGCGAAGTGGCTGGTGAGATGTTCAAAAAGCATGACGCGGTTCTTGCAGGGAGGAAGATTTACGAGGCCATGAGAGGGGAGCATGGGACTGAGGGTTCCCTTGTAACTTCTCAGTACAACTCACACTGGCGCATGCTGAGGCGCTTGTGCACCTCTGAGTTCTTTGTTACCAGTCGCTTAGATGCGATGCGGGGTGTTCGTGAAAAATGTATACACCGCATGCTGCGTTTGATTGAAGAAGCTGGTGAATCAGGCACACGTGCGGTTGATGTTGGGAGGTTTTTTTTCTTGATGGATTTTAACCTTATTGGGAACCTCGTATTCTCAAAGGACTTGTTGGATTCTGAGACTGAGAGAGGGGATAGATTTTATTACCATGCACTTAAGGTTATGGAGTATGCTGGGAAGCCCAACATGGCAGATTTCTTGCCATTTCTCAAGTGGTTTGATCCTCAGGGTATAAGGAGGAAGACACAGTTCCACGTCAACCAAGCCTTTGACATTGCAGGCTCGTTCATCAAAGAAAGGATGGAAAAGAGTCACGGTGGATCCAAGGAAACAAAAGATTACTTGGATGTCTTGTTGGCCTTTCGTGGGGATTCTACCACTCAGCCCTATACTTTTTCTTCAAGAACTATTAACGTTATTATCTTTGAAATGTTCACTGCAGGAACAGACACGACGACGAGCACAATCGAATGGGCAATGGCAGAGCTTCTGCACAACCCAAGAACGCTAAAGAAAGTGCAGATAGAGTTGAGGAACAAAATAGGGTCCGGTAGGAACATGGAAGAAAAGGACATGGAGAATCTTCCCTACCTGCAAGCGGTGATCAAGGAGACACTGAGACTTCACCCACCTCTTCCTCTTATGGTTCCTCATATGGCTATGGAGTCTTGCAACATGCTTGGCTACGATATTCCCAAAGAGTCACAGATTTTAGTGAATGTTTGGGCAATAGGAAGGGACTGCAAAGTGTGGGATGCTCCCTTATTGTTCTGGCCTGAAAGATTTCTGGAGCCAAACACCGTGGTGGACTACAAAGGGCGTCATTTTGAGTTTATACCCTTTGGTTCGGGTCGAAGAATGTGCCCAGCCATGCCACTCGCCTCTCGTGTGCTTACCTTGGCATTGGGCTCCCTCTTGCATTCCTTTGACTGGGTTTTGCCAGATGGCCTCAAACCAGAGGAGATGGACATGACTGAGGGACTGGGAATAACGCTGAGGAAAGCCATTCCTTTGAAAGCCATACCAGTGCCTTATAGAGGAGCTACTACAGCAAACGAATAA 1530 0.4745 MEYEVVSMLALGMLVLGMLVRMKVMEGRQQLPPGPRCWPVVGNMFQLGWSPHESFAKLAHKHGPVMRLWLGSMCTVVISSSEVAGEMFKKHDAVLAGRKIYEAMRGEHGTEGSLVTSQYNSHWRMLRRLCTSEFFVTSRLDAMRGVREKCIHRMLRLIEEAGESGTRAVDVGRFFFLMDFNLIGNLVFSKDLLDSETERGDRFYYHALKVMEYAGKPNMADFLPFLKWFDPQGIRRKTQFHVNQAFDIAGSFIKERMEKSHGGSKETKDYLDVLLAFRGDSTTQPYTFSSRTINVIIFEMFTAGTDTTTSTIEWAMAELLHNPRTLKKVQIELRNKIGSGRNMEEKDMENLPYLQAVIKETLRLHPPLPLMVPHMAMESCNMLGYDIPKESQILVNVWAIGRDCKVWDAPLLFWPERFLEPNTVVDYKGRHFEFIPFGSGRRMCPAMPLASRVLTLALGSLLHSFDWVLPDGLKPEEMDMTEGLGITLRKAIPLKAIPVPYRGATTANE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00030 509 Gene3D Cytochrome P450 21 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 CDD CYP76-like 59 498 - -
Vian3g00030 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vian3g00030 509 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 18 500 - -
Vian3g00030 509 FunFam Cytochrome P450 76C4 23 497 - -
Vian3g00030 509 Pfam Cytochrome P450 32 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian3g00030 509 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00030 Vian-Chr3 242624 244233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00030 28 504 Cytochrome P450 AT3G52970 62.851 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00030 - - gmx:100778988 844.728